Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp43Q8BUM9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.42■□□□□ 0.38
Usp43Q8BUM9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Usp43Q8BUM9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.42■□□□□ 0.38
Usp43Q8BUM9 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.42■□□□□ 0.38
Usp43Q8BUM9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Usp43Q8BUM9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.42■□□□□ 0.38
Usp43Q8BUM9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Usp43Q8BUM9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp43Q8BUM9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Usp43Q8BUM9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp43Q8BUM9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp43Q8BUM9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Usp43Q8BUM9 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp43Q8BUM9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.41■□□□□ 0.38
Usp43Q8BUM9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp43Q8BUM9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.41■□□□□ 0.38
Usp43Q8BUM9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp43Q8BUM9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Usp43Q8BUM9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp43Q8BUM9 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.41■□□□□ 0.38
Usp43Q8BUM9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.41■□□□□ 0.38
Usp43Q8BUM9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp43Q8BUM9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
Usp43Q8BUM9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp43Q8BUM9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp43Q8BUM9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Usp43Q8BUM9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp43Q8BUM9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.4■□□□□ 0.38
Usp43Q8BUM9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Usp43Q8BUM9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp43Q8BUM9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp43Q8BUM9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.4■□□□□ 0.38
Usp43Q8BUM9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.4■□□□□ 0.38
Usp43Q8BUM9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp43Q8BUM9 Gm7638-201ENSMUST00000121348 967 ntBASIC17.4■□□□□ 0.38
Usp43Q8BUM9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.4■□□□□ 0.38
Usp43Q8BUM9 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.4■□□□□ 0.38
Usp43Q8BUM9 Odf3b-204ENSMUST00000227834 930 ntBASIC17.4■□□□□ 0.38
Usp43Q8BUM9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp43Q8BUM9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp43Q8BUM9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp43Q8BUM9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Usp43Q8BUM9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp43Q8BUM9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp43Q8BUM9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp43Q8BUM9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Usp43Q8BUM9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Usp43Q8BUM9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Usp43Q8BUM9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp43Q8BUM9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp43Q8BUM9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp43Q8BUM9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp43Q8BUM9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp43Q8BUM9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp43Q8BUM9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp43Q8BUM9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp43Q8BUM9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Usp43Q8BUM9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp43Q8BUM9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp43Q8BUM9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp43Q8BUM9 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.39■□□□□ 0.37
Usp43Q8BUM9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp43Q8BUM9 Mir5122-201ENSMUST00000175004 89 ntBASIC17.39■□□□□ 0.37
Usp43Q8BUM9 Gm9731-201ENSMUST00000209480 747 ntBASIC17.39■□□□□ 0.37
Usp43Q8BUM9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp43Q8BUM9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp43Q8BUM9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp43Q8BUM9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Usp43Q8BUM9 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.39■□□□□ 0.37
Usp43Q8BUM9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp43Q8BUM9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp43Q8BUM9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp43Q8BUM9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp43Q8BUM9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp43Q8BUM9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp43Q8BUM9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Usp43Q8BUM9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Usp43Q8BUM9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp43Q8BUM9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Usp43Q8BUM9 Gm21814-202ENSMUST00000203277 873 ntBASIC17.38■□□□□ 0.37
Usp43Q8BUM9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.38■□□□□ 0.37
Usp43Q8BUM9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp43Q8BUM9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp43Q8BUM9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Usp43Q8BUM9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp43Q8BUM9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp43Q8BUM9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp43Q8BUM9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp43Q8BUM9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp43Q8BUM9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Usp43Q8BUM9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp43Q8BUM9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp43Q8BUM9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Usp43Q8BUM9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp43Q8BUM9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Usp43Q8BUM9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Usp43Q8BUM9 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.37■□□□□ 0.37
Usp43Q8BUM9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Usp43Q8BUM9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms