Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.36■□□□□ 0.37
Ubr7Q8BU04 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ubr7Q8BU04 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ubr7Q8BU04 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ubr7Q8BU04 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ubr7Q8BU04 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.36■□□□□ 0.37
Ubr7Q8BU04 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Ubr7Q8BU04 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ubr7Q8BU04 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ubr7Q8BU04 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Ubr7Q8BU04 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ubr7Q8BU04 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ubr7Q8BU04 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ubr7Q8BU04 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ubr7Q8BU04 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ubr7Q8BU04 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr7Q8BU04 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr7Q8BU04 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr7Q8BU04 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr7Q8BU04 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr7Q8BU04 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr7Q8BU04 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr7Q8BU04 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr7Q8BU04 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr7Q8BU04 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr7Q8BU04 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ubr7Q8BU04 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr7Q8BU04 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr7Q8BU04 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr7Q8BU04 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr7Q8BU04 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr7Q8BU04 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr7Q8BU04 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr7Q8BU04 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr7Q8BU04 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Ubr7Q8BU04 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ubr7Q8BU04 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr7Q8BU04 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr7Q8BU04 Rarb-207ENSMUST00000225921 2756 ntBASIC17.34■□□□□ 0.37
Ubr7Q8BU04 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr7Q8BU04 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr7Q8BU04 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr7Q8BU04 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr7Q8BU04 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr7Q8BU04 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr7Q8BU04 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr7Q8BU04 Gm18958-201ENSMUST00000174258 762 ntBASIC17.34■□□□□ 0.37
Ubr7Q8BU04 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ubr7Q8BU04 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.34■□□□□ 0.37
Ubr7Q8BU04 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.34■□□□□ 0.37
Ubr7Q8BU04 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr7Q8BU04 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr7Q8BU04 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.34■□□□□ 0.37
Ubr7Q8BU04 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr7Q8BU04 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr7Q8BU04 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ubr7Q8BU04 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ubr7Q8BU04 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ubr7Q8BU04 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.33■□□□□ 0.37
Ubr7Q8BU04 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.33■□□□□ 0.37
Ubr7Q8BU04 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ubr7Q8BU04 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ubr7Q8BU04 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Ubr7Q8BU04 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ubr7Q8BU04 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ubr7Q8BU04 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ubr7Q8BU04 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ubr7Q8BU04 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ubr7Q8BU04 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ubr7Q8BU04 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ubr7Q8BU04 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr7Q8BU04 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr7Q8BU04 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr7Q8BU04 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr7Q8BU04 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr7Q8BU04 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr7Q8BU04 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr7Q8BU04 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Ubr7Q8BU04 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Ubr7Q8BU04 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Ubr7Q8BU04 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ubr7Q8BU04 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr7Q8BU04 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.32■□□□□ 0.36
Ubr7Q8BU04 Gm27389-201ENSMUST00000183622 195 ntBASIC17.32■□□□□ 0.36
Ubr7Q8BU04 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Ubr7Q8BU04 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr7Q8BU04 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr7Q8BU04 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr7Q8BU04 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.32■□□□□ 0.36
Ubr7Q8BU04 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr7Q8BU04 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr7Q8BU04 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr7Q8BU04 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ubr7Q8BU04 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr7Q8BU04 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr7Q8BU04 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr7Q8BU04 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ubr7Q8BU04 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ubr7Q8BU04 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.31■□□□□ 0.36
Ubr7Q8BU04 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms