Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Nup54Q8BTS4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nup54Q8BTS4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup54Q8BTS4 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.62■□□□□ 0.41
Nup54Q8BTS4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.62■□□□□ 0.41
Nup54Q8BTS4 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup54Q8BTS4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.62■□□□□ 0.41
Nup54Q8BTS4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup54Q8BTS4 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.62■□□□□ 0.41
Nup54Q8BTS4 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.62■□□□□ 0.41
Nup54Q8BTS4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup54Q8BTS4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.62■□□□□ 0.41
Nup54Q8BTS4 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nup54Q8BTS4 Gm18959-201ENSMUST00000208954 655 ntBASIC17.62■□□□□ 0.41
Nup54Q8BTS4 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Nup54Q8BTS4 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nup54Q8BTS4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup54Q8BTS4 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nup54Q8BTS4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup54Q8BTS4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup54Q8BTS4 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Nup54Q8BTS4 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup54Q8BTS4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nup54Q8BTS4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup54Q8BTS4 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup54Q8BTS4 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup54Q8BTS4 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.61■□□□□ 0.41
Nup54Q8BTS4 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup54Q8BTS4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Nup54Q8BTS4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Nup54Q8BTS4 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Nup54Q8BTS4 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup54Q8BTS4 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nup54Q8BTS4 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup54Q8BTS4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup54Q8BTS4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.61■□□□□ 0.41
Nup54Q8BTS4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nup54Q8BTS4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Nup54Q8BTS4 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup54Q8BTS4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup54Q8BTS4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup54Q8BTS4 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup54Q8BTS4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup54Q8BTS4 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Nup54Q8BTS4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Nup54Q8BTS4 Gm13836-201ENSMUST00000121159 501 ntBASIC17.6■□□□□ 0.41
Nup54Q8BTS4 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nup54Q8BTS4 Gm10231-201ENSMUST00000181584 441 ntBASIC17.6■□□□□ 0.41
Nup54Q8BTS4 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup54Q8BTS4 Gm45058-201ENSMUST00000205810 766 ntBASIC17.6■□□□□ 0.41
Nup54Q8BTS4 Gm10175-202ENSMUST00000208752 441 ntBASIC17.6■□□□□ 0.41
Nup54Q8BTS4 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.6■□□□□ 0.41
Nup54Q8BTS4 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.6■□□□□ 0.41
Nup54Q8BTS4 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup54Q8BTS4 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup54Q8BTS4 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.6■□□□□ 0.41
Nup54Q8BTS4 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup54Q8BTS4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.6■□□□□ 0.41
Nup54Q8BTS4 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup54Q8BTS4 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup54Q8BTS4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Nup54Q8BTS4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup54Q8BTS4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup54Q8BTS4 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup54Q8BTS4 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nup54Q8BTS4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Nup54Q8BTS4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup54Q8BTS4 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup54Q8BTS4 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup54Q8BTS4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Nup54Q8BTS4 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.59■□□□□ 0.41
Nup54Q8BTS4 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup54Q8BTS4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Nup54Q8BTS4 Gm16061-201ENSMUST00000122167 857 ntBASIC17.59■□□□□ 0.41
Nup54Q8BTS4 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.59■□□□□ 0.41
Nup54Q8BTS4 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nup54Q8BTS4 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.59■□□□□ 0.41
Nup54Q8BTS4 Gm7370-201ENSMUST00000219471 767 ntBASIC17.59■□□□□ 0.41
Nup54Q8BTS4 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup54Q8BTS4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Nup54Q8BTS4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup54Q8BTS4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup54Q8BTS4 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nup54Q8BTS4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nup54Q8BTS4 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nup54Q8BTS4 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nup54Q8BTS4 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nup54Q8BTS4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Nup54Q8BTS4 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Nup54Q8BTS4 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nup54Q8BTS4 Mir5130-201ENSMUST00000175160 84 ntBASIC17.58■□□□□ 0.4
Nup54Q8BTS4 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.58■□□□□ 0.4
Nup54Q8BTS4 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.58■□□□□ 0.4
Nup54Q8BTS4 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nup54Q8BTS4 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nup54Q8BTS4 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.58■□□□□ 0.4
Nup54Q8BTS4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Nup54Q8BTS4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nup54Q8BTS4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nup54Q8BTS4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms