Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.66■□□□□ 0.26
Cpne3Q8BT60 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne3Q8BT60 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne3Q8BT60 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne3Q8BT60 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne3Q8BT60 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne3Q8BT60 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cpne3Q8BT60 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne3Q8BT60 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.65■□□□□ 0.26
Cpne3Q8BT60 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.65■□□□□ 0.26
Cpne3Q8BT60 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne3Q8BT60 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne3Q8BT60 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cpne3Q8BT60 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne3Q8BT60 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne3Q8BT60 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne3Q8BT60 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne3Q8BT60 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne3Q8BT60 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne3Q8BT60 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.65■□□□□ 0.26
Cpne3Q8BT60 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne3Q8BT60 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne3Q8BT60 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Cpne3Q8BT60 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cpne3Q8BT60 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cpne3Q8BT60 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cpne3Q8BT60 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne3Q8BT60 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne3Q8BT60 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne3Q8BT60 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne3Q8BT60 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne3Q8BT60 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne3Q8BT60 Gm13401-201ENSMUST00000117074 291 ntBASIC16.64■□□□□ 0.25
Cpne3Q8BT60 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne3Q8BT60 Mir8112-201ENSMUST00000184382 131 ntBASIC16.64■□□□□ 0.25
Cpne3Q8BT60 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.64■□□□□ 0.25
Cpne3Q8BT60 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Cpne3Q8BT60 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne3Q8BT60 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne3Q8BT60 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.64■□□□□ 0.25
Cpne3Q8BT60 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne3Q8BT60 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cpne3Q8BT60 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne3Q8BT60 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne3Q8BT60 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne3Q8BT60 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne3Q8BT60 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne3Q8BT60 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne3Q8BT60 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Cpne3Q8BT60 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne3Q8BT60 Gm10138-203ENSMUST00000206952 366 ntBASIC16.63■□□□□ 0.25
Cpne3Q8BT60 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Cpne3Q8BT60 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne3Q8BT60 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne3Q8BT60 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne3Q8BT60 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne3Q8BT60 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cpne3Q8BT60 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Cpne3Q8BT60 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Cpne3Q8BT60 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne3Q8BT60 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.63■□□□□ 0.25
Cpne3Q8BT60 Dio3-201ENSMUST00000097228 1449 ntBASIC16.62■□□□□ 0.25
Cpne3Q8BT60 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.62■□□□□ 0.25
Cpne3Q8BT60 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne3Q8BT60 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne3Q8BT60 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne3Q8BT60 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne3Q8BT60 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne3Q8BT60 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.62■□□□□ 0.25
Cpne3Q8BT60 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne3Q8BT60 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne3Q8BT60 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne3Q8BT60 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.62■□□□□ 0.25
Cpne3Q8BT60 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne3Q8BT60 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.62■□□□□ 0.25
Cpne3Q8BT60 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne3Q8BT60 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne3Q8BT60 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne3Q8BT60 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne3Q8BT60 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.61■□□□□ 0.25
Cpne3Q8BT60 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.61■□□□□ 0.25
Cpne3Q8BT60 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpne3Q8BT60 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.61■□□□□ 0.25
Cpne3Q8BT60 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpne3Q8BT60 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpne3Q8BT60 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpne3Q8BT60 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.61■□□□□ 0.25
Cpne3Q8BT60 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.61■□□□□ 0.25
Cpne3Q8BT60 Mir6349-201ENSMUST00000184059 97 ntBASIC16.61■□□□□ 0.25
Cpne3Q8BT60 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Cpne3Q8BT60 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpne3Q8BT60 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpne3Q8BT60 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpne3Q8BT60 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpne3Q8BT60 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cpne3Q8BT60 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpne3Q8BT60 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpne3Q8BT60 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpne3Q8BT60 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpne3Q8BT60 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms