Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scfd1Q8BRF7 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scfd1Q8BRF7 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scfd1Q8BRF7 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scfd1Q8BRF7 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scfd1Q8BRF7 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scfd1Q8BRF7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scfd1Q8BRF7 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scfd1Q8BRF7 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scfd1Q8BRF7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scfd1Q8BRF7 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scfd1Q8BRF7 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scfd1Q8BRF7 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scfd1Q8BRF7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Scfd1Q8BRF7 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Scfd1Q8BRF7 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Scfd1Q8BRF7 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scfd1Q8BRF7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Scfd1Q8BRF7 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Scfd1Q8BRF7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scfd1Q8BRF7 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scfd1Q8BRF7 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Scfd1Q8BRF7 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scfd1Q8BRF7 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scfd1Q8BRF7 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scfd1Q8BRF7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Scfd1Q8BRF7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Scfd1Q8BRF7 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Scfd1Q8BRF7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scfd1Q8BRF7 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Scfd1Q8BRF7 Gm7284-201ENSMUST00000131667 944 ntBASIC19.67■□□□□ 0.74
Scfd1Q8BRF7 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Scfd1Q8BRF7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.67■□□□□ 0.74
Scfd1Q8BRF7 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scfd1Q8BRF7 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scfd1Q8BRF7 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scfd1Q8BRF7 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Scfd1Q8BRF7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scfd1Q8BRF7 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scfd1Q8BRF7 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scfd1Q8BRF7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Scfd1Q8BRF7 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scfd1Q8BRF7 Gm37722-201ENSMUST00000193757 208 ntBASIC19.66■□□□□ 0.74
Scfd1Q8BRF7 Gm17808-201ENSMUST00000200859 894 ntBASIC19.66■□□□□ 0.74
Scfd1Q8BRF7 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scfd1Q8BRF7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.66■□□□□ 0.74
Scfd1Q8BRF7 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.66■□□□□ 0.74
Scfd1Q8BRF7 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scfd1Q8BRF7 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scfd1Q8BRF7 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Scfd1Q8BRF7 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scfd1Q8BRF7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.65■□□□□ 0.74
Scfd1Q8BRF7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scfd1Q8BRF7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scfd1Q8BRF7 Gm27704-201ENSMUST00000185094 107 ntBASIC19.65■□□□□ 0.74
Scfd1Q8BRF7 Gm8969-201ENSMUST00000199694 526 ntBASIC19.65■□□□□ 0.74
Scfd1Q8BRF7 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Scfd1Q8BRF7 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scfd1Q8BRF7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scfd1Q8BRF7 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scfd1Q8BRF7 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.65■□□□□ 0.74
Scfd1Q8BRF7 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Scfd1Q8BRF7 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scfd1Q8BRF7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Scfd1Q8BRF7 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Scfd1Q8BRF7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Scfd1Q8BRF7 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.64■□□□□ 0.74
Scfd1Q8BRF7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Scfd1Q8BRF7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.64■□□□□ 0.73
Scfd1Q8BRF7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.64■□□□□ 0.73
Scfd1Q8BRF7 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Scfd1Q8BRF7 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Scfd1Q8BRF7 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.64■□□□□ 0.73
Scfd1Q8BRF7 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.64■□□□□ 0.73
Scfd1Q8BRF7 Ank2-226ENSMUST00000189368 339 ntBASIC19.64■□□□□ 0.73
Scfd1Q8BRF7 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Scfd1Q8BRF7 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Scfd1Q8BRF7 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.64■□□□□ 0.73
Scfd1Q8BRF7 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.64■□□□□ 0.73
Scfd1Q8BRF7 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scfd1Q8BRF7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scfd1Q8BRF7 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scfd1Q8BRF7 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.64■□□□□ 0.73
Scfd1Q8BRF7 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scfd1Q8BRF7 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scfd1Q8BRF7 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scfd1Q8BRF7 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scfd1Q8BRF7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scfd1Q8BRF7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scfd1Q8BRF7 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scfd1Q8BRF7 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.62■□□□□ 0.73
Scfd1Q8BRF7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scfd1Q8BRF7 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Scfd1Q8BRF7 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Scfd1Q8BRF7 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Scfd1Q8BRF7 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Scfd1Q8BRF7 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.62■□□□□ 0.73
Scfd1Q8BRF7 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.62■□□□□ 0.73
Scfd1Q8BRF7 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.62■□□□□ 0.73
Scfd1Q8BRF7 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms