Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Suds3Q8BR65 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Suds3Q8BR65 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Suds3Q8BR65 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Suds3Q8BR65 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Suds3Q8BR65 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Suds3Q8BR65 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Suds3Q8BR65 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Suds3Q8BR65 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Suds3Q8BR65 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Suds3Q8BR65 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Suds3Q8BR65 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.66■□□□□ 0.42
Suds3Q8BR65 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Suds3Q8BR65 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Suds3Q8BR65 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Suds3Q8BR65 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Suds3Q8BR65 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Suds3Q8BR65 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Suds3Q8BR65 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Suds3Q8BR65 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Suds3Q8BR65 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Suds3Q8BR65 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Suds3Q8BR65 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Suds3Q8BR65 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Suds3Q8BR65 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Suds3Q8BR65 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Suds3Q8BR65 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Suds3Q8BR65 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Suds3Q8BR65 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Suds3Q8BR65 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Suds3Q8BR65 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Suds3Q8BR65 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Suds3Q8BR65 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Suds3Q8BR65 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Suds3Q8BR65 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.65■□□□□ 0.42
Suds3Q8BR65 Mir6982-201ENSMUST00000184354 68 ntBASIC17.65■□□□□ 0.42
Suds3Q8BR65 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.65■□□□□ 0.42
Suds3Q8BR65 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Suds3Q8BR65 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Suds3Q8BR65 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Suds3Q8BR65 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Suds3Q8BR65 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.64■□□□□ 0.41
Suds3Q8BR65 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Suds3Q8BR65 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Suds3Q8BR65 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Suds3Q8BR65 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Suds3Q8BR65 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Suds3Q8BR65 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Suds3Q8BR65 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Suds3Q8BR65 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Suds3Q8BR65 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Suds3Q8BR65 Gm15378-201ENSMUST00000121894 207 ntBASIC17.64■□□□□ 0.41
Suds3Q8BR65 Mir2861-201ENSMUST00000175539 82 ntBASIC17.64■□□□□ 0.41
Suds3Q8BR65 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.64■□□□□ 0.41
Suds3Q8BR65 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Suds3Q8BR65 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Suds3Q8BR65 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Suds3Q8BR65 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Suds3Q8BR65 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Suds3Q8BR65 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Suds3Q8BR65 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Suds3Q8BR65 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Suds3Q8BR65 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Suds3Q8BR65 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Suds3Q8BR65 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Suds3Q8BR65 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.64■□□□□ 0.41
Suds3Q8BR65 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Suds3Q8BR65 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Suds3Q8BR65 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Suds3Q8BR65 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Suds3Q8BR65 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Suds3Q8BR65 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Suds3Q8BR65 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Suds3Q8BR65 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Suds3Q8BR65 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Suds3Q8BR65 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Suds3Q8BR65 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Suds3Q8BR65 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Suds3Q8BR65 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Suds3Q8BR65 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.63■□□□□ 0.41
Suds3Q8BR65 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Suds3Q8BR65 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Suds3Q8BR65 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Suds3Q8BR65 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Suds3Q8BR65 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.62■□□□□ 0.41
Suds3Q8BR65 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Suds3Q8BR65 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Suds3Q8BR65 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Suds3Q8BR65 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Suds3Q8BR65 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Suds3Q8BR65 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Suds3Q8BR65 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.62■□□□□ 0.41
Suds3Q8BR65 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Suds3Q8BR65 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.62■□□□□ 0.41
Suds3Q8BR65 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Suds3Q8BR65 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Suds3Q8BR65 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Suds3Q8BR65 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Suds3Q8BR65 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Suds3Q8BR65 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms