Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sfr1Q8BP27 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sfr1Q8BP27 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sfr1Q8BP27 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sfr1Q8BP27 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Sfr1Q8BP27 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Sfr1Q8BP27 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sfr1Q8BP27 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sfr1Q8BP27 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sfr1Q8BP27 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sfr1Q8BP27 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sfr1Q8BP27 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.48■□□□□ 0.39
Sfr1Q8BP27 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.48■□□□□ 0.39
Sfr1Q8BP27 Gm38027-201ENSMUST00000192315 235 ntBASIC17.48■□□□□ 0.39
Sfr1Q8BP27 Gm3375-201ENSMUST00000203929 796 ntBASIC17.48■□□□□ 0.39
Sfr1Q8BP27 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sfr1Q8BP27 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.48■□□□□ 0.39
Sfr1Q8BP27 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sfr1Q8BP27 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sfr1Q8BP27 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sfr1Q8BP27 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Sfr1Q8BP27 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Sfr1Q8BP27 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Sfr1Q8BP27 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sfr1Q8BP27 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sfr1Q8BP27 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sfr1Q8BP27 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Sfr1Q8BP27 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.47■□□□□ 0.39
Sfr1Q8BP27 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sfr1Q8BP27 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sfr1Q8BP27 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sfr1Q8BP27 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.47■□□□□ 0.39
Sfr1Q8BP27 Mir6982-201ENSMUST00000184354 68 ntBASIC17.47■□□□□ 0.39
Sfr1Q8BP27 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Sfr1Q8BP27 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.47■□□□□ 0.39
Sfr1Q8BP27 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.47■□□□□ 0.39
Sfr1Q8BP27 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.47■□□□□ 0.39
Sfr1Q8BP27 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.47■□□□□ 0.39
Sfr1Q8BP27 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.47■□□□□ 0.39
Sfr1Q8BP27 Gm5417-201ENSMUST00000079706 384 ntBASIC17.47■□□□□ 0.39
Sfr1Q8BP27 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sfr1Q8BP27 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sfr1Q8BP27 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sfr1Q8BP27 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sfr1Q8BP27 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sfr1Q8BP27 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sfr1Q8BP27 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sfr1Q8BP27 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sfr1Q8BP27 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.47■□□□□ 0.39
Sfr1Q8BP27 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sfr1Q8BP27 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sfr1Q8BP27 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sfr1Q8BP27 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sfr1Q8BP27 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sfr1Q8BP27 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sfr1Q8BP27 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sfr1Q8BP27 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.46■□□□□ 0.39
Sfr1Q8BP27 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sfr1Q8BP27 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.46■□□□□ 0.39
Sfr1Q8BP27 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sfr1Q8BP27 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Sfr1Q8BP27 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.46■□□□□ 0.39
Sfr1Q8BP27 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sfr1Q8BP27 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sfr1Q8BP27 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sfr1Q8BP27 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sfr1Q8BP27 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sfr1Q8BP27 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.45■□□□□ 0.38
Sfr1Q8BP27 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.45■□□□□ 0.38
Sfr1Q8BP27 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.45■□□□□ 0.38
Sfr1Q8BP27 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sfr1Q8BP27 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.45■□□□□ 0.38
Sfr1Q8BP27 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.45■□□□□ 0.38
Sfr1Q8BP27 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.45■□□□□ 0.38
Sfr1Q8BP27 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sfr1Q8BP27 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sfr1Q8BP27 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sfr1Q8BP27 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.45■□□□□ 0.38
Sfr1Q8BP27 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sfr1Q8BP27 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sfr1Q8BP27 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.44■□□□□ 0.38
Sfr1Q8BP27 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sfr1Q8BP27 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sfr1Q8BP27 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Sfr1Q8BP27 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sfr1Q8BP27 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sfr1Q8BP27 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Sfr1Q8BP27 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sfr1Q8BP27 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sfr1Q8BP27 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sfr1Q8BP27 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Sfr1Q8BP27 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.44■□□□□ 0.38
Sfr1Q8BP27 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sfr1Q8BP27 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sfr1Q8BP27 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sfr1Q8BP27 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.44■□□□□ 0.38
Sfr1Q8BP27 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sfr1Q8BP27 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sfr1Q8BP27 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sfr1Q8BP27 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms