Protein–RNA interactions for Protein: Q8BMN3

Chrnb3, Neuronal acetylcholine receptor subunit beta-3, mousemouse

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrnb3Q8BMN3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chrnb3Q8BMN3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.83■□□□□ 0.28
Chrnb3Q8BMN3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.83■□□□□ 0.28
Chrnb3Q8BMN3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chrnb3Q8BMN3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chrnb3Q8BMN3 Mir5130-201ENSMUST00000175160 84 ntBASIC16.83■□□□□ 0.28
Chrnb3Q8BMN3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chrnb3Q8BMN3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Chrnb3Q8BMN3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
Chrnb3Q8BMN3 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chrnb3Q8BMN3 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chrnb3Q8BMN3 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chrnb3Q8BMN3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrnb3Q8BMN3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chrnb3Q8BMN3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrnb3Q8BMN3 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrnb3Q8BMN3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.82■□□□□ 0.28
Chrnb3Q8BMN3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrnb3Q8BMN3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrnb3Q8BMN3 Rarb-207ENSMUST00000225921 2756 ntBASIC16.82■□□□□ 0.28
Chrnb3Q8BMN3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrnb3Q8BMN3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.82■□□□□ 0.28
Chrnb3Q8BMN3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Chrnb3Q8BMN3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.82■□□□□ 0.28
Chrnb3Q8BMN3 Gm8969-201ENSMUST00000199694 526 ntBASIC16.82■□□□□ 0.28
Chrnb3Q8BMN3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.82■□□□□ 0.28
Chrnb3Q8BMN3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrnb3Q8BMN3 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrnb3Q8BMN3 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrnb3Q8BMN3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrnb3Q8BMN3 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chrnb3Q8BMN3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.82■□□□□ 0.28
Chrnb3Q8BMN3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrnb3Q8BMN3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chrnb3Q8BMN3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chrnb3Q8BMN3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.81■□□□□ 0.28
Chrnb3Q8BMN3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.81■□□□□ 0.28
Chrnb3Q8BMN3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrnb3Q8BMN3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Chrnb3Q8BMN3 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrnb3Q8BMN3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chrnb3Q8BMN3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrnb3Q8BMN3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.81■□□□□ 0.28
Chrnb3Q8BMN3 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrnb3Q8BMN3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrnb3Q8BMN3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrnb3Q8BMN3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrnb3Q8BMN3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Chrnb3Q8BMN3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrnb3Q8BMN3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Chrnb3Q8BMN3 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chrnb3Q8BMN3 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrnb3Q8BMN3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrnb3Q8BMN3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.81■□□□□ 0.28
Chrnb3Q8BMN3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrnb3Q8BMN3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrnb3Q8BMN3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrnb3Q8BMN3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Chrnb3Q8BMN3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Chrnb3Q8BMN3 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chrnb3Q8BMN3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Chrnb3Q8BMN3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.8■□□□□ 0.28
Chrnb3Q8BMN3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.8■□□□□ 0.28
Chrnb3Q8BMN3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chrnb3Q8BMN3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.8■□□□□ 0.28
Chrnb3Q8BMN3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Chrnb3Q8BMN3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.8■□□□□ 0.28
Chrnb3Q8BMN3 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chrnb3Q8BMN3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.8■□□□□ 0.28
Chrnb3Q8BMN3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Chrnb3Q8BMN3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.8■□□□□ 0.28
Chrnb3Q8BMN3 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chrnb3Q8BMN3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chrnb3Q8BMN3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chrnb3Q8BMN3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chrnb3Q8BMN3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chrnb3Q8BMN3 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.79■□□□□ 0.28
Chrnb3Q8BMN3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chrnb3Q8BMN3 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.79■□□□□ 0.28
Chrnb3Q8BMN3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chrnb3Q8BMN3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Chrnb3Q8BMN3 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.79■□□□□ 0.28
Chrnb3Q8BMN3 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chrnb3Q8BMN3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chrnb3Q8BMN3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chrnb3Q8BMN3 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Chrnb3Q8BMN3 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Chrnb3Q8BMN3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chrnb3Q8BMN3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Chrnb3Q8BMN3 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.79■□□□□ 0.28
Chrnb3Q8BMN3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.79■□□□□ 0.28
Chrnb3Q8BMN3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrnb3Q8BMN3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chrnb3Q8BMN3 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.78■□□□□ 0.28
Chrnb3Q8BMN3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.78■□□□□ 0.28
Chrnb3Q8BMN3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrnb3Q8BMN3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chrnb3Q8BMN3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.78■□□□□ 0.28
Chrnb3Q8BMN3 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.78■□□□□ 0.28
Chrnb3Q8BMN3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms