Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm18195-201ENSMUST00000207604 706 ntBASIC22.61■■□□□ 1.21
Col16a1Q8BLX7 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC22.61■■□□□ 1.21
Col16a1Q8BLX7 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Col16a1Q8BLX7 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC22.61■■□□□ 1.21
Col16a1Q8BLX7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col16a1Q8BLX7 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Col16a1Q8BLX7 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC22.61■■□□□ 1.21
Col16a1Q8BLX7 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col16a1Q8BLX7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col16a1Q8BLX7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col16a1Q8BLX7 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Col16a1Q8BLX7 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col16a1Q8BLX7 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Col16a1Q8BLX7 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Col16a1Q8BLX7 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC22.6■■□□□ 1.21
Col16a1Q8BLX7 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC22.6■■□□□ 1.21
Col16a1Q8BLX7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col16a1Q8BLX7 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col16a1Q8BLX7 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC22.59■■□□□ 1.21
Col16a1Q8BLX7 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC22.59■■□□□ 1.21
Col16a1Q8BLX7 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC22.59■■□□□ 1.21
Col16a1Q8BLX7 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col16a1Q8BLX7 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC22.59■■□□□ 1.21
Col16a1Q8BLX7 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Col16a1Q8BLX7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col16a1Q8BLX7 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC22.59■■□□□ 1.21
Col16a1Q8BLX7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col16a1Q8BLX7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col16a1Q8BLX7 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Col16a1Q8BLX7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col16a1Q8BLX7 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col16a1Q8BLX7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col16a1Q8BLX7 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Col16a1Q8BLX7 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC22.59■■□□□ 1.21
Col16a1Q8BLX7 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Col16a1Q8BLX7 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Col16a1Q8BLX7 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC22.58■■□□□ 1.21
Col16a1Q8BLX7 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col16a1Q8BLX7 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col16a1Q8BLX7 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col16a1Q8BLX7 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col16a1Q8BLX7 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col16a1Q8BLX7 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
Col16a1Q8BLX7 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Col16a1Q8BLX7 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC22.58■■□□□ 1.2
Col16a1Q8BLX7 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC22.58■■□□□ 1.2
Col16a1Q8BLX7 Gm18421-201ENSMUST00000204122 625 ntBASIC22.58■■□□□ 1.2
Col16a1Q8BLX7 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Col16a1Q8BLX7 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Col16a1Q8BLX7 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC22.58■■□□□ 1.2
Col16a1Q8BLX7 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Col16a1Q8BLX7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Col16a1Q8BLX7 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Col16a1Q8BLX7 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col16a1Q8BLX7 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col16a1Q8BLX7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Col16a1Q8BLX7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col16a1Q8BLX7 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Col16a1Q8BLX7 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Col16a1Q8BLX7 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col16a1Q8BLX7 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Col16a1Q8BLX7 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC22.57■■□□□ 1.2
Col16a1Q8BLX7 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col16a1Q8BLX7 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC22.57■■□□□ 1.2
Col16a1Q8BLX7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC22.57■■□□□ 1.2
Col16a1Q8BLX7 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Col16a1Q8BLX7 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC22.57■■□□□ 1.2
Col16a1Q8BLX7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col16a1Q8BLX7 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col16a1Q8BLX7 Wnt10b-204ENSMUST00000226655 1807 ntBASIC22.57■■□□□ 1.2
Col16a1Q8BLX7 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col16a1Q8BLX7 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC22.56■■□□□ 1.2
Col16a1Q8BLX7 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC22.56■■□□□ 1.2
Col16a1Q8BLX7 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Col16a1Q8BLX7 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Col16a1Q8BLX7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Col16a1Q8BLX7 Gm7935-201ENSMUST00000100555 1278 ntBASIC22.56■■□□□ 1.2
Col16a1Q8BLX7 Gm44357-201ENSMUST00000195897 142 ntBASIC22.56■■□□□ 1.2
Col16a1Q8BLX7 Gm19658-201ENSMUST00000196231 138 ntBASIC22.56■■□□□ 1.2
Col16a1Q8BLX7 Gm44367-201ENSMUST00000196836 138 ntBASIC22.56■■□□□ 1.2
Col16a1Q8BLX7 Gm44350-201ENSMUST00000197197 138 ntBASIC22.56■■□□□ 1.2
Col16a1Q8BLX7 Gm44390-201ENSMUST00000197533 144 ntBASIC22.56■■□□□ 1.2
Col16a1Q8BLX7 Gm44313-201ENSMUST00000198018 138 ntBASIC22.56■■□□□ 1.2
Col16a1Q8BLX7 Gm44486-201ENSMUST00000198508 138 ntBASIC22.56■■□□□ 1.2
Col16a1Q8BLX7 Gm44454-201ENSMUST00000198541 138 ntBASIC22.56■■□□□ 1.2
Col16a1Q8BLX7 Gm44314-201ENSMUST00000199263 138 ntBASIC22.56■■□□□ 1.2
Col16a1Q8BLX7 Gm44394-201ENSMUST00000199558 138 ntBASIC22.56■■□□□ 1.2
Col16a1Q8BLX7 Gm44484-201ENSMUST00000199873 138 ntBASIC22.56■■□□□ 1.2
Col16a1Q8BLX7 Gm44466-201ENSMUST00000200264 138 ntBASIC22.56■■□□□ 1.2
Col16a1Q8BLX7 Gm44359-201ENSMUST00000200671 138 ntBASIC22.56■■□□□ 1.2
Col16a1Q8BLX7 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Col16a1Q8BLX7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Col16a1Q8BLX7 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC22.56■■□□□ 1.2
Col16a1Q8BLX7 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Col16a1Q8BLX7 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Col16a1Q8BLX7 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Col16a1Q8BLX7 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col16a1Q8BLX7 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Col16a1Q8BLX7 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
Col16a1Q8BLX7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms