Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdhr3Q8BL00 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdhr3Q8BL00 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cdhr3Q8BL00 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Cdhr3Q8BL00 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cdhr3Q8BL00 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdhr3Q8BL00 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdhr3Q8BL00 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdhr3Q8BL00 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdhr3Q8BL00 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cdhr3Q8BL00 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.03■□□□□ -0
Cdhr3Q8BL00 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cdhr3Q8BL00 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cdhr3Q8BL00 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cdhr3Q8BL00 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cdhr3Q8BL00 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.03■□□□□ -0
Cdhr3Q8BL00 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdhr3Q8BL00 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdhr3Q8BL00 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdhr3Q8BL00 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.03■□□□□ -0
Cdhr3Q8BL00 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.03■□□□□ -0
Cdhr3Q8BL00 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdhr3Q8BL00 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.03■□□□□ -0
Cdhr3Q8BL00 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.03■□□□□ -0
Cdhr3Q8BL00 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdhr3Q8BL00 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdhr3Q8BL00 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.03■□□□□ -0
Cdhr3Q8BL00 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cdhr3Q8BL00 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdhr3Q8BL00 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdhr3Q8BL00 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.02■□□□□ -0
Cdhr3Q8BL00 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdhr3Q8BL00 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cdhr3Q8BL00 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdhr3Q8BL00 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Cdhr3Q8BL00 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdhr3Q8BL00 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdhr3Q8BL00 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdhr3Q8BL00 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cdhr3Q8BL00 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdhr3Q8BL00 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdhr3Q8BL00 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdhr3Q8BL00 Gm13216-201ENSMUST00000117145 591 ntBASIC15.02■□□□□ -0
Cdhr3Q8BL00 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cdhr3Q8BL00 Gm10138-203ENSMUST00000206952 366 ntBASIC15.02■□□□□ -0
Cdhr3Q8BL00 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdhr3Q8BL00 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
Cdhr3Q8BL00 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Cdhr3Q8BL00 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.02□□□□□ -0.01
Cdhr3Q8BL00 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdhr3Q8BL00 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdhr3Q8BL00 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdhr3Q8BL00 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdhr3Q8BL00 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr3Q8BL00 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdhr3Q8BL00 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdhr3Q8BL00 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdhr3Q8BL00 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdhr3Q8BL00 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cdhr3Q8BL00 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
Cdhr3Q8BL00 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15□□□□□ -0.01
Cdhr3Q8BL00 AC122769.4-201ENSMUST00000228166 901 ntBASIC15□□□□□ -0.01
Cdhr3Q8BL00 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cdhr3Q8BL00 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdhr3Q8BL00 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cdhr3Q8BL00 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15□□□□□ -0.01
Cdhr3Q8BL00 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms