Protein–RNA interactions for Protein: Q8BKS9

Pum3, Pumilio homolog 3, mousemouse

Known RBP Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pum3Q8BKS9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pum3Q8BKS9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pum3Q8BKS9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pum3Q8BKS9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pum3Q8BKS9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pum3Q8BKS9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pum3Q8BKS9 Gm15565-201ENSMUST00000118890 427 ntBASIC18.22■□□□□ 0.51
Pum3Q8BKS9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pum3Q8BKS9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pum3Q8BKS9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Pum3Q8BKS9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pum3Q8BKS9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.22■□□□□ 0.51
Pum3Q8BKS9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pum3Q8BKS9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.22■□□□□ 0.51
Pum3Q8BKS9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pum3Q8BKS9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Pum3Q8BKS9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pum3Q8BKS9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pum3Q8BKS9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pum3Q8BKS9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Pum3Q8BKS9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.21■□□□□ 0.51
Pum3Q8BKS9 Gm7791-201ENSMUST00000219066 539 ntBASIC18.21■□□□□ 0.51
Pum3Q8BKS9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pum3Q8BKS9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Pum3Q8BKS9 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Pum3Q8BKS9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pum3Q8BKS9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pum3Q8BKS9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pum3Q8BKS9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pum3Q8BKS9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.21■□□□□ 0.51
Pum3Q8BKS9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pum3Q8BKS9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Pum3Q8BKS9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.21■□□□□ 0.5
Pum3Q8BKS9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pum3Q8BKS9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pum3Q8BKS9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Pum3Q8BKS9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pum3Q8BKS9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pum3Q8BKS9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pum3Q8BKS9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pum3Q8BKS9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.2■□□□□ 0.5
Pum3Q8BKS9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.2■□□□□ 0.5
Pum3Q8BKS9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pum3Q8BKS9 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pum3Q8BKS9 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.2■□□□□ 0.5
Pum3Q8BKS9 Il3ra-202ENSMUST00000223589 738 ntBASIC18.2■□□□□ 0.5
Pum3Q8BKS9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pum3Q8BKS9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pum3Q8BKS9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pum3Q8BKS9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Pum3Q8BKS9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Pum3Q8BKS9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pum3Q8BKS9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.2■□□□□ 0.5
Pum3Q8BKS9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pum3Q8BKS9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pum3Q8BKS9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pum3Q8BKS9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pum3Q8BKS9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pum3Q8BKS9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Pum3Q8BKS9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pum3Q8BKS9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pum3Q8BKS9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pum3Q8BKS9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.19■□□□□ 0.5
Pum3Q8BKS9 Gm11539-201ENSMUST00000119837 557 ntBASIC18.19■□□□□ 0.5
Pum3Q8BKS9 Gm13436-201ENSMUST00000120418 567 ntBASIC18.19■□□□□ 0.5
Pum3Q8BKS9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pum3Q8BKS9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pum3Q8BKS9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pum3Q8BKS9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Pum3Q8BKS9 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.19■□□□□ 0.5
Pum3Q8BKS9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pum3Q8BKS9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pum3Q8BKS9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pum3Q8BKS9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.18■□□□□ 0.5
Pum3Q8BKS9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pum3Q8BKS9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pum3Q8BKS9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pum3Q8BKS9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pum3Q8BKS9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.18■□□□□ 0.5
Pum3Q8BKS9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pum3Q8BKS9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Pum3Q8BKS9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pum3Q8BKS9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pum3Q8BKS9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Pum3Q8BKS9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Pum3Q8BKS9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pum3Q8BKS9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pum3Q8BKS9 Gm43799-201ENSMUST00000201845 579 ntBASIC18.17■□□□□ 0.5
Pum3Q8BKS9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Pum3Q8BKS9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.17■□□□□ 0.5
Pum3Q8BKS9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pum3Q8BKS9 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pum3Q8BKS9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.17■□□□□ 0.5
Pum3Q8BKS9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pum3Q8BKS9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pum3Q8BKS9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pum3Q8BKS9 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.17■□□□□ 0.5
Pum3Q8BKS9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pum3Q8BKS9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pum3Q8BKS9 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms