Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SynbQ8BI41 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SynbQ8BI41 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SynbQ8BI41 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SynbQ8BI41 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SynbQ8BI41 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SynbQ8BI41 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SynbQ8BI41 AA414768-201ENSMUST00000121924 1257 ntBASIC16.4■□□□□ 0.22
SynbQ8BI41 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SynbQ8BI41 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SynbQ8BI41 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SynbQ8BI41 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SynbQ8BI41 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.4■□□□□ 0.22
SynbQ8BI41 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SynbQ8BI41 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SynbQ8BI41 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SynbQ8BI41 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SynbQ8BI41 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SynbQ8BI41 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.39■□□□□ 0.21
SynbQ8BI41 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SynbQ8BI41 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SynbQ8BI41 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SynbQ8BI41 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SynbQ8BI41 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SynbQ8BI41 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SynbQ8BI41 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SynbQ8BI41 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SynbQ8BI41 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SynbQ8BI41 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.39■□□□□ 0.21
SynbQ8BI41 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SynbQ8BI41 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.39■□□□□ 0.21
SynbQ8BI41 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.39■□□□□ 0.21
SynbQ8BI41 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SynbQ8BI41 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SynbQ8BI41 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SynbQ8BI41 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SynbQ8BI41 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SynbQ8BI41 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SynbQ8BI41 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SynbQ8BI41 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SynbQ8BI41 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SynbQ8BI41 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SynbQ8BI41 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SynbQ8BI41 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SynbQ8BI41 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SynbQ8BI41 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SynbQ8BI41 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SynbQ8BI41 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SynbQ8BI41 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SynbQ8BI41 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SynbQ8BI41 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SynbQ8BI41 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SynbQ8BI41 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.38■□□□□ 0.21
SynbQ8BI41 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SynbQ8BI41 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SynbQ8BI41 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SynbQ8BI41 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.38■□□□□ 0.21
SynbQ8BI41 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.38■□□□□ 0.21
SynbQ8BI41 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.38■□□□□ 0.21
SynbQ8BI41 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.38■□□□□ 0.21
SynbQ8BI41 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SynbQ8BI41 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SynbQ8BI41 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.38■□□□□ 0.21
SynbQ8BI41 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.38■□□□□ 0.21
SynbQ8BI41 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SynbQ8BI41 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SynbQ8BI41 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SynbQ8BI41 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SynbQ8BI41 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SynbQ8BI41 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SynbQ8BI41 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SynbQ8BI41 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SynbQ8BI41 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SynbQ8BI41 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SynbQ8BI41 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SynbQ8BI41 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SynbQ8BI41 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SynbQ8BI41 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SynbQ8BI41 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.37■□□□□ 0.21
SynbQ8BI41 Gm12085-201ENSMUST00000119263 940 ntBASIC16.37■□□□□ 0.21
SynbQ8BI41 Gm6345-202ENSMUST00000180900 204 ntBASIC16.37■□□□□ 0.21
SynbQ8BI41 Gm38027-201ENSMUST00000192315 235 ntBASIC16.37■□□□□ 0.21
SynbQ8BI41 Gm33142-201ENSMUST00000193913 867 ntBASIC16.37■□□□□ 0.21
SynbQ8BI41 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SynbQ8BI41 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SynbQ8BI41 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SynbQ8BI41 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.37■□□□□ 0.21
SynbQ8BI41 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SynbQ8BI41 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SynbQ8BI41 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SynbQ8BI41 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SynbQ8BI41 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.36■□□□□ 0.21
SynbQ8BI41 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SynbQ8BI41 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SynbQ8BI41 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SynbQ8BI41 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SynbQ8BI41 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SynbQ8BI41 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SynbQ8BI41 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SynbQ8BI41 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms