Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf38Q8BI21 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf38Q8BI21 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf38Q8BI21 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf38Q8BI21 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf38Q8BI21 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf38Q8BI21 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rnf38Q8BI21 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf38Q8BI21 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.61■□□□□ 0.25
Rnf38Q8BI21 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf38Q8BI21 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf38Q8BI21 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.6■□□□□ 0.25
Rnf38Q8BI21 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.6■□□□□ 0.25
Rnf38Q8BI21 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf38Q8BI21 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.6■□□□□ 0.25
Rnf38Q8BI21 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf38Q8BI21 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Rnf38Q8BI21 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf38Q8BI21 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.6■□□□□ 0.25
Rnf38Q8BI21 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf38Q8BI21 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Rnf38Q8BI21 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf38Q8BI21 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf38Q8BI21 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf38Q8BI21 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf38Q8BI21 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf38Q8BI21 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf38Q8BI21 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.59■□□□□ 0.25
Rnf38Q8BI21 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.59■□□□□ 0.25
Rnf38Q8BI21 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rnf38Q8BI21 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rnf38Q8BI21 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf38Q8BI21 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rnf38Q8BI21 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.59■□□□□ 0.25
Rnf38Q8BI21 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf38Q8BI21 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf38Q8BI21 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf38Q8BI21 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf38Q8BI21 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf38Q8BI21 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf38Q8BI21 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.59■□□□□ 0.25
Rnf38Q8BI21 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rnf38Q8BI21 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.59■□□□□ 0.25
Rnf38Q8BI21 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf38Q8BI21 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rnf38Q8BI21 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rnf38Q8BI21 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rnf38Q8BI21 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.58■□□□□ 0.24
Rnf38Q8BI21 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf38Q8BI21 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Rnf38Q8BI21 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.58■□□□□ 0.24
Rnf38Q8BI21 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf38Q8BI21 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf38Q8BI21 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf38Q8BI21 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf38Q8BI21 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf38Q8BI21 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.58■□□□□ 0.24
Rnf38Q8BI21 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Rnf38Q8BI21 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf38Q8BI21 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf38Q8BI21 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf38Q8BI21 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf38Q8BI21 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf38Q8BI21 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf38Q8BI21 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf38Q8BI21 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf38Q8BI21 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Rnf38Q8BI21 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf38Q8BI21 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf38Q8BI21 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.57■□□□□ 0.24
Rnf38Q8BI21 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf38Q8BI21 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf38Q8BI21 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf38Q8BI21 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Rnf38Q8BI21 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf38Q8BI21 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf38Q8BI21 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Rnf38Q8BI21 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Rnf38Q8BI21 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Rnf38Q8BI21 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf38Q8BI21 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf38Q8BI21 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.57■□□□□ 0.24
Rnf38Q8BI21 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf38Q8BI21 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf38Q8BI21 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rnf38Q8BI21 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rnf38Q8BI21 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rnf38Q8BI21 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf38Q8BI21 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf38Q8BI21 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf38Q8BI21 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf38Q8BI21 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Rnf38Q8BI21 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf38Q8BI21 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Rnf38Q8BI21 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.56■□□□□ 0.24
Rnf38Q8BI21 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf38Q8BI21 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Rnf38Q8BI21 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.56■□□□□ 0.24
Rnf38Q8BI21 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf38Q8BI21 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms