Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trim23Q8BGX0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim23Q8BGX0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim23Q8BGX0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim23Q8BGX0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trim23Q8BGX0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim23Q8BGX0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim23Q8BGX0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim23Q8BGX0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim23Q8BGX0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim23Q8BGX0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim23Q8BGX0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trim23Q8BGX0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.59■□□□□ 0.25
Trim23Q8BGX0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim23Q8BGX0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.59■□□□□ 0.25
Trim23Q8BGX0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim23Q8BGX0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trim23Q8BGX0 Gm2274-201ENSMUST00000184539 609 ntBASIC16.59■□□□□ 0.25
Trim23Q8BGX0 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim23Q8BGX0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trim23Q8BGX0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim23Q8BGX0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.59■□□□□ 0.25
Trim23Q8BGX0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim23Q8BGX0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim23Q8BGX0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim23Q8BGX0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim23Q8BGX0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim23Q8BGX0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.58■□□□□ 0.25
Trim23Q8BGX0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim23Q8BGX0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trim23Q8BGX0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim23Q8BGX0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trim23Q8BGX0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim23Q8BGX0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.58■□□□□ 0.24
Trim23Q8BGX0 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.58■□□□□ 0.24
Trim23Q8BGX0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim23Q8BGX0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim23Q8BGX0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim23Q8BGX0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim23Q8BGX0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim23Q8BGX0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim23Q8BGX0 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.58■□□□□ 0.24
Trim23Q8BGX0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.58■□□□□ 0.24
Trim23Q8BGX0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim23Q8BGX0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim23Q8BGX0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim23Q8BGX0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim23Q8BGX0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim23Q8BGX0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim23Q8BGX0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim23Q8BGX0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim23Q8BGX0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim23Q8BGX0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim23Q8BGX0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim23Q8BGX0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim23Q8BGX0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trim23Q8BGX0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Trim23Q8BGX0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trim23Q8BGX0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.57■□□□□ 0.24
Trim23Q8BGX0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.57■□□□□ 0.24
Trim23Q8BGX0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Trim23Q8BGX0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim23Q8BGX0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.57■□□□□ 0.24
Trim23Q8BGX0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim23Q8BGX0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim23Q8BGX0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim23Q8BGX0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trim23Q8BGX0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim23Q8BGX0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.56■□□□□ 0.24
Trim23Q8BGX0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trim23Q8BGX0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim23Q8BGX0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim23Q8BGX0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim23Q8BGX0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim23Q8BGX0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trim23Q8BGX0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Trim23Q8BGX0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trim23Q8BGX0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Trim23Q8BGX0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.56■□□□□ 0.24
Trim23Q8BGX0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim23Q8BGX0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim23Q8BGX0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim23Q8BGX0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim23Q8BGX0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim23Q8BGX0 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.55■□□□□ 0.24
Trim23Q8BGX0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim23Q8BGX0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim23Q8BGX0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.55■□□□□ 0.24
Trim23Q8BGX0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim23Q8BGX0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim23Q8BGX0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim23Q8BGX0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Trim23Q8BGX0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim23Q8BGX0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim23Q8BGX0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim23Q8BGX0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim23Q8BGX0 Gm10231-201ENSMUST00000181584 441 ntBASIC16.55■□□□□ 0.24
Trim23Q8BGX0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim23Q8BGX0 Gm45058-201ENSMUST00000205810 766 ntBASIC16.55■□□□□ 0.24
Trim23Q8BGX0 Gm10175-202ENSMUST00000208752 441 ntBASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms