Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim6Q8BGE7 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim6Q8BGE7 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim6Q8BGE7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.3■□□□□ 0.52
Trim6Q8BGE7 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim6Q8BGE7 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim6Q8BGE7 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim6Q8BGE7 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim6Q8BGE7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim6Q8BGE7 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim6Q8BGE7 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim6Q8BGE7 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim6Q8BGE7 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim6Q8BGE7 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.29■□□□□ 0.52
Trim6Q8BGE7 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim6Q8BGE7 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim6Q8BGE7 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Trim6Q8BGE7 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim6Q8BGE7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim6Q8BGE7 Gm2399-201ENSMUST00000104944 225 ntBASIC18.29■□□□□ 0.52
Trim6Q8BGE7 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.29■□□□□ 0.52
Trim6Q8BGE7 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim6Q8BGE7 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim6Q8BGE7 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim6Q8BGE7 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim6Q8BGE7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim6Q8BGE7 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim6Q8BGE7 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Trim6Q8BGE7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim6Q8BGE7 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.28■□□□□ 0.52
Trim6Q8BGE7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim6Q8BGE7 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim6Q8BGE7 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim6Q8BGE7 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Trim6Q8BGE7 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim6Q8BGE7 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Trim6Q8BGE7 Gm10418-201ENSMUST00000100943 576 ntBASIC18.28■□□□□ 0.52
Trim6Q8BGE7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim6Q8BGE7 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Trim6Q8BGE7 Gm7291-201ENSMUST00000199147 382 ntBASIC18.28■□□□□ 0.52
Trim6Q8BGE7 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim6Q8BGE7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim6Q8BGE7 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.28■□□□□ 0.52
Trim6Q8BGE7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.28■□□□□ 0.52
Trim6Q8BGE7 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim6Q8BGE7 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim6Q8BGE7 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim6Q8BGE7 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.27■□□□□ 0.52
Trim6Q8BGE7 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.27■□□□□ 0.52
Trim6Q8BGE7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Trim6Q8BGE7 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim6Q8BGE7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim6Q8BGE7 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim6Q8BGE7 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim6Q8BGE7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.27■□□□□ 0.52
Trim6Q8BGE7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim6Q8BGE7 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trim6Q8BGE7 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Trim6Q8BGE7 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim6Q8BGE7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.27■□□□□ 0.52
Trim6Q8BGE7 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim6Q8BGE7 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim6Q8BGE7 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trim6Q8BGE7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim6Q8BGE7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Trim6Q8BGE7 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim6Q8BGE7 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim6Q8BGE7 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim6Q8BGE7 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim6Q8BGE7 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim6Q8BGE7 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim6Q8BGE7 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim6Q8BGE7 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim6Q8BGE7 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim6Q8BGE7 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.26■□□□□ 0.51
Trim6Q8BGE7 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Trim6Q8BGE7 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Trim6Q8BGE7 Gm7290-201ENSMUST00000104990 617 ntBASIC18.26■□□□□ 0.51
Trim6Q8BGE7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim6Q8BGE7 Gm12918-201ENSMUST00000120234 636 ntBASIC18.26■□□□□ 0.51
Trim6Q8BGE7 Gm15710-201ENSMUST00000121821 636 ntBASIC18.26■□□□□ 0.51
Trim6Q8BGE7 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim6Q8BGE7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.26■□□□□ 0.51
Trim6Q8BGE7 Gm5075-201ENSMUST00000196916 622 ntBASIC18.26■□□□□ 0.51
Trim6Q8BGE7 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.26■□□□□ 0.51
Trim6Q8BGE7 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.26■□□□□ 0.51
Trim6Q8BGE7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim6Q8BGE7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Trim6Q8BGE7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Trim6Q8BGE7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.26■□□□□ 0.51
Trim6Q8BGE7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.26■□□□□ 0.51
Trim6Q8BGE7 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim6Q8BGE7 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim6Q8BGE7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.26■□□□□ 0.51
Trim6Q8BGE7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim6Q8BGE7 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.26■□□□□ 0.51
Trim6Q8BGE7 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim6Q8BGE7 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.26■□□□□ 0.51
Trim6Q8BGE7 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim6Q8BGE7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms