Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim65Q8BFW4 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim65Q8BFW4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Trim65Q8BFW4 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim65Q8BFW4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim65Q8BFW4 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim65Q8BFW4 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim65Q8BFW4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim65Q8BFW4 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim65Q8BFW4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim65Q8BFW4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim65Q8BFW4 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Trim65Q8BFW4 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim65Q8BFW4 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim65Q8BFW4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim65Q8BFW4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Trim65Q8BFW4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim65Q8BFW4 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim65Q8BFW4 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.44■□□□□ 0.54
Trim65Q8BFW4 Gm12085-201ENSMUST00000119263 940 ntBASIC18.44■□□□□ 0.54
Trim65Q8BFW4 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.44■□□□□ 0.54
Trim65Q8BFW4 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.44■□□□□ 0.54
Trim65Q8BFW4 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim65Q8BFW4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trim65Q8BFW4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim65Q8BFW4 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim65Q8BFW4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim65Q8BFW4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.44■□□□□ 0.54
Trim65Q8BFW4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim65Q8BFW4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Trim65Q8BFW4 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim65Q8BFW4 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim65Q8BFW4 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim65Q8BFW4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim65Q8BFW4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim65Q8BFW4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim65Q8BFW4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim65Q8BFW4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim65Q8BFW4 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim65Q8BFW4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim65Q8BFW4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Trim65Q8BFW4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim65Q8BFW4 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Trim65Q8BFW4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.43■□□□□ 0.54
Trim65Q8BFW4 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim65Q8BFW4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Trim65Q8BFW4 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim65Q8BFW4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim65Q8BFW4 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim65Q8BFW4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim65Q8BFW4 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim65Q8BFW4 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim65Q8BFW4 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim65Q8BFW4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim65Q8BFW4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.42■□□□□ 0.54
Trim65Q8BFW4 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim65Q8BFW4 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim65Q8BFW4 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.42■□□□□ 0.54
Trim65Q8BFW4 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.42■□□□□ 0.54
Trim65Q8BFW4 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim65Q8BFW4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim65Q8BFW4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim65Q8BFW4 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trim65Q8BFW4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim65Q8BFW4 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim65Q8BFW4 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.41■□□□□ 0.54
Trim65Q8BFW4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Trim65Q8BFW4 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Trim65Q8BFW4 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Trim65Q8BFW4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim65Q8BFW4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim65Q8BFW4 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim65Q8BFW4 Gm715-201ENSMUST00000117865 831 ntBASIC18.41■□□□□ 0.54
Trim65Q8BFW4 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.41■□□□□ 0.54
Trim65Q8BFW4 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim65Q8BFW4 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.41■□□□□ 0.54
Trim65Q8BFW4 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
Trim65Q8BFW4 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim65Q8BFW4 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim65Q8BFW4 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim65Q8BFW4 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.4■□□□□ 0.54
Trim65Q8BFW4 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim65Q8BFW4 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim65Q8BFW4 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.4■□□□□ 0.54
Trim65Q8BFW4 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.4■□□□□ 0.54
Trim65Q8BFW4 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.4■□□□□ 0.54
Trim65Q8BFW4 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim65Q8BFW4 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Trim65Q8BFW4 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim65Q8BFW4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim65Q8BFW4 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim65Q8BFW4 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trim65Q8BFW4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Trim65Q8BFW4 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim65Q8BFW4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Trim65Q8BFW4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim65Q8BFW4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim65Q8BFW4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim65Q8BFW4 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trim65Q8BFW4 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms