Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.87■□□□□ 0.13
Pif1Q80SX8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pif1Q80SX8 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pif1Q80SX8 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Pif1Q80SX8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.87■□□□□ 0.13
Pif1Q80SX8 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Pif1Q80SX8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pif1Q80SX8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.87■□□□□ 0.13
Pif1Q80SX8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pif1Q80SX8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.87■□□□□ 0.13
Pif1Q80SX8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pif1Q80SX8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pif1Q80SX8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pif1Q80SX8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pif1Q80SX8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pif1Q80SX8 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.86■□□□□ 0.13
Pif1Q80SX8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pif1Q80SX8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pif1Q80SX8 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pif1Q80SX8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pif1Q80SX8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pif1Q80SX8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pif1Q80SX8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.86■□□□□ 0.13
Pif1Q80SX8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.86■□□□□ 0.13
Pif1Q80SX8 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
Pif1Q80SX8 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.86■□□□□ 0.13
Pif1Q80SX8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.86■□□□□ 0.13
Pif1Q80SX8 Gm9013-201ENSMUST00000132939 882 ntBASIC15.86■□□□□ 0.13
Pif1Q80SX8 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.86■□□□□ 0.13
Pif1Q80SX8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pif1Q80SX8 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pif1Q80SX8 Gm7213-201ENSMUST00000215977 950 ntBASIC15.86■□□□□ 0.13
Pif1Q80SX8 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pif1Q80SX8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pif1Q80SX8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pif1Q80SX8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pif1Q80SX8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pif1Q80SX8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pif1Q80SX8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pif1Q80SX8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pif1Q80SX8 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pif1Q80SX8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Pif1Q80SX8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pif1Q80SX8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pif1Q80SX8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pif1Q80SX8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pif1Q80SX8 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pif1Q80SX8 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.85■□□□□ 0.13
Pif1Q80SX8 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.85■□□□□ 0.13
Pif1Q80SX8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pif1Q80SX8 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.85■□□□□ 0.13
Pif1Q80SX8 Il3ra-202ENSMUST00000223589 738 ntBASIC15.85■□□□□ 0.13
Pif1Q80SX8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pif1Q80SX8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pif1Q80SX8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pif1Q80SX8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pif1Q80SX8 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
Pif1Q80SX8 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pif1Q80SX8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pif1Q80SX8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pif1Q80SX8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pif1Q80SX8 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pif1Q80SX8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pif1Q80SX8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Pif1Q80SX8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pif1Q80SX8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Pif1Q80SX8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pif1Q80SX8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pif1Q80SX8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pif1Q80SX8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pif1Q80SX8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pif1Q80SX8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.84■□□□□ 0.13
Pif1Q80SX8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pif1Q80SX8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pif1Q80SX8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pif1Q80SX8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pif1Q80SX8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pif1Q80SX8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pif1Q80SX8 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pif1Q80SX8 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.84■□□□□ 0.13
Pif1Q80SX8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pif1Q80SX8 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
Pif1Q80SX8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pif1Q80SX8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pif1Q80SX8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pif1Q80SX8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pif1Q80SX8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pif1Q80SX8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pif1Q80SX8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pif1Q80SX8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pif1Q80SX8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pif1Q80SX8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Pif1Q80SX8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pif1Q80SX8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Pif1Q80SX8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pif1Q80SX8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.83■□□□□ 0.12
Pif1Q80SX8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pif1Q80SX8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Pif1Q80SX8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Pif1Q80SX8 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms