Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh8Q7TSK3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh8Q7TSK3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh8Q7TSK3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh8Q7TSK3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Pcdh8Q7TSK3 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh8Q7TSK3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh8Q7TSK3 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.98■□□□□ 0.31
Pcdh8Q7TSK3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh8Q7TSK3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh8Q7TSK3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Pcdh8Q7TSK3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh8Q7TSK3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh8Q7TSK3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh8Q7TSK3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh8Q7TSK3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh8Q7TSK3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh8Q7TSK3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh8Q7TSK3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh8Q7TSK3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.98■□□□□ 0.31
Pcdh8Q7TSK3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh8Q7TSK3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh8Q7TSK3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh8Q7TSK3 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh8Q7TSK3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh8Q7TSK3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh8Q7TSK3 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Pcdh8Q7TSK3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh8Q7TSK3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh8Q7TSK3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh8Q7TSK3 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Pcdh8Q7TSK3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh8Q7TSK3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh8Q7TSK3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.97■□□□□ 0.31
Pcdh8Q7TSK3 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdh8Q7TSK3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh8Q7TSK3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh8Q7TSK3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh8Q7TSK3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.96■□□□□ 0.31
Pcdh8Q7TSK3 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh8Q7TSK3 Gm23634-201ENSMUST00000175071 91 ntBASIC16.96■□□□□ 0.31
Pcdh8Q7TSK3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh8Q7TSK3 Gm18101-201ENSMUST00000215769 548 ntBASIC16.96■□□□□ 0.31
Pcdh8Q7TSK3 Gm18032-201ENSMUST00000222541 538 ntBASIC16.96■□□□□ 0.31
Pcdh8Q7TSK3 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.96■□□□□ 0.31
Pcdh8Q7TSK3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh8Q7TSK3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh8Q7TSK3 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh8Q7TSK3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh8Q7TSK3 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.96■□□□□ 0.31
Pcdh8Q7TSK3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh8Q7TSK3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdh8Q7TSK3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdh8Q7TSK3 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdh8Q7TSK3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdh8Q7TSK3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh8Q7TSK3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.95■□□□□ 0.3
Pcdh8Q7TSK3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh8Q7TSK3 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh8Q7TSK3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.95■□□□□ 0.3
Pcdh8Q7TSK3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Pcdh8Q7TSK3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh8Q7TSK3 Gm22697-201ENSMUST00000175194 63 ntBASIC16.95■□□□□ 0.3
Pcdh8Q7TSK3 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.95■□□□□ 0.3
Pcdh8Q7TSK3 Gm7791-201ENSMUST00000219066 539 ntBASIC16.95■□□□□ 0.3
Pcdh8Q7TSK3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh8Q7TSK3 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Pcdh8Q7TSK3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh8Q7TSK3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh8Q7TSK3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh8Q7TSK3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh8Q7TSK3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh8Q7TSK3 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh8Q7TSK3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh8Q7TSK3 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh8Q7TSK3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh8Q7TSK3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh8Q7TSK3 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Pcdh8Q7TSK3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh8Q7TSK3 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh8Q7TSK3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Pcdh8Q7TSK3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh8Q7TSK3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh8Q7TSK3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Pcdh8Q7TSK3 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.94■□□□□ 0.3
Pcdh8Q7TSK3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh8Q7TSK3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.94■□□□□ 0.3
Pcdh8Q7TSK3 Gm21362-201ENSMUST00000194272 928 ntBASIC16.94■□□□□ 0.3
Pcdh8Q7TSK3 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.94■□□□□ 0.3
Pcdh8Q7TSK3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Pcdh8Q7TSK3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh8Q7TSK3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh8Q7TSK3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Pcdh8Q7TSK3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh8Q7TSK3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh8Q7TSK3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh8Q7TSK3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh8Q7TSK3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh8Q7TSK3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh8Q7TSK3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms