Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.86■□□□□ 0.61
Sh3d21Q7TSG5 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3d21Q7TSG5 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3d21Q7TSG5 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3d21Q7TSG5 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3d21Q7TSG5 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Sh3d21Q7TSG5 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3d21Q7TSG5 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3d21Q7TSG5 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3d21Q7TSG5 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3d21Q7TSG5 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Sh3d21Q7TSG5 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3d21Q7TSG5 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3d21Q7TSG5 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.85■□□□□ 0.61
Sh3d21Q7TSG5 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.85■□□□□ 0.61
Sh3d21Q7TSG5 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.85■□□□□ 0.61
Sh3d21Q7TSG5 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Sh3d21Q7TSG5 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3d21Q7TSG5 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Sh3d21Q7TSG5 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3d21Q7TSG5 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3d21Q7TSG5 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Sh3d21Q7TSG5 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3d21Q7TSG5 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3d21Q7TSG5 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3d21Q7TSG5 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3d21Q7TSG5 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3d21Q7TSG5 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3d21Q7TSG5 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3d21Q7TSG5 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3d21Q7TSG5 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3d21Q7TSG5 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.84■□□□□ 0.61
Sh3d21Q7TSG5 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3d21Q7TSG5 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3d21Q7TSG5 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Sh3d21Q7TSG5 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.84■□□□□ 0.61
Sh3d21Q7TSG5 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Sh3d21Q7TSG5 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3d21Q7TSG5 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3d21Q7TSG5 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3d21Q7TSG5 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3d21Q7TSG5 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sh3d21Q7TSG5 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sh3d21Q7TSG5 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sh3d21Q7TSG5 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sh3d21Q7TSG5 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sh3d21Q7TSG5 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.83■□□□□ 0.6
Sh3d21Q7TSG5 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3d21Q7TSG5 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3d21Q7TSG5 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.83■□□□□ 0.6
Sh3d21Q7TSG5 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3d21Q7TSG5 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3d21Q7TSG5 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Sh3d21Q7TSG5 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.83■□□□□ 0.6
Sh3d21Q7TSG5 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3d21Q7TSG5 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3d21Q7TSG5 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3d21Q7TSG5 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.83■□□□□ 0.6
Sh3d21Q7TSG5 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3d21Q7TSG5 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3d21Q7TSG5 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.82■□□□□ 0.6
Sh3d21Q7TSG5 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3d21Q7TSG5 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.82■□□□□ 0.6
Sh3d21Q7TSG5 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.82■□□□□ 0.6
Sh3d21Q7TSG5 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3d21Q7TSG5 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Sh3d21Q7TSG5 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.82■□□□□ 0.6
Sh3d21Q7TSG5 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3d21Q7TSG5 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3d21Q7TSG5 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.82■□□□□ 0.6
Sh3d21Q7TSG5 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.82■□□□□ 0.6
Sh3d21Q7TSG5 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3d21Q7TSG5 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3d21Q7TSG5 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3d21Q7TSG5 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3d21Q7TSG5 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3d21Q7TSG5 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3d21Q7TSG5 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3d21Q7TSG5 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3d21Q7TSG5 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.81■□□□□ 0.6
Sh3d21Q7TSG5 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3d21Q7TSG5 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3d21Q7TSG5 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3d21Q7TSG5 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3d21Q7TSG5 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3d21Q7TSG5 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.81■□□□□ 0.6
Sh3d21Q7TSG5 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.81■□□□□ 0.6
Sh3d21Q7TSG5 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3d21Q7TSG5 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.81■□□□□ 0.6
Sh3d21Q7TSG5 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.81■□□□□ 0.6
Sh3d21Q7TSG5 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3d21Q7TSG5 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3d21Q7TSG5 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3d21Q7TSG5 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3d21Q7TSG5 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3d21Q7TSG5 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3d21Q7TSG5 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.8■□□□□ 0.6
Sh3d21Q7TSG5 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.8■□□□□ 0.6
Sh3d21Q7TSG5 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.8■□□□□ 0.6
Sh3d21Q7TSG5 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms