Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cspg5Q71M36 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cspg5Q71M36 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cspg5Q71M36 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cspg5Q71M36 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cspg5Q71M36 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cspg5Q71M36 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cspg5Q71M36 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cspg5Q71M36 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cspg5Q71M36 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cspg5Q71M36 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.82■□□□□ 0.44
Cspg5Q71M36 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cspg5Q71M36 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cspg5Q71M36 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cspg5Q71M36 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cspg5Q71M36 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cspg5Q71M36 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cspg5Q71M36 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cspg5Q71M36 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cspg5Q71M36 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cspg5Q71M36 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cspg5Q71M36 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cspg5Q71M36 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cspg5Q71M36 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.81■□□□□ 0.44
Cspg5Q71M36 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cspg5Q71M36 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cspg5Q71M36 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Cspg5Q71M36 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cspg5Q71M36 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cspg5Q71M36 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cspg5Q71M36 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cspg5Q71M36 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cspg5Q71M36 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cspg5Q71M36 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cspg5Q71M36 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cspg5Q71M36 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cspg5Q71M36 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cspg5Q71M36 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cspg5Q71M36 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cspg5Q71M36 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cspg5Q71M36 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cspg5Q71M36 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cspg5Q71M36 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cspg5Q71M36 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cspg5Q71M36 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cspg5Q71M36 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cspg5Q71M36 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cspg5Q71M36 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.8■□□□□ 0.44
Cspg5Q71M36 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cspg5Q71M36 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cspg5Q71M36 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cspg5Q71M36 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cspg5Q71M36 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cspg5Q71M36 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cspg5Q71M36 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cspg5Q71M36 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cspg5Q71M36 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cspg5Q71M36 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cspg5Q71M36 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cspg5Q71M36 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Cspg5Q71M36 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.79■□□□□ 0.44
Cspg5Q71M36 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.79■□□□□ 0.44
Cspg5Q71M36 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cspg5Q71M36 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cspg5Q71M36 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cspg5Q71M36 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Cspg5Q71M36 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cspg5Q71M36 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cspg5Q71M36 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cspg5Q71M36 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cspg5Q71M36 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cspg5Q71M36 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.78■□□□□ 0.44
Cspg5Q71M36 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cspg5Q71M36 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cspg5Q71M36 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.78■□□□□ 0.44
Cspg5Q71M36 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cspg5Q71M36 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cspg5Q71M36 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cspg5Q71M36 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cspg5Q71M36 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cspg5Q71M36 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cspg5Q71M36 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.78■□□□□ 0.44
Cspg5Q71M36 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cspg5Q71M36 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cspg5Q71M36 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cspg5Q71M36 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cspg5Q71M36 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cspg5Q71M36 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cspg5Q71M36 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cspg5Q71M36 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.77■□□□□ 0.44
Cspg5Q71M36 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cspg5Q71M36 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.77■□□□□ 0.44
Cspg5Q71M36 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.77■□□□□ 0.44
Cspg5Q71M36 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.77■□□□□ 0.44
Cspg5Q71M36 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cspg5Q71M36 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cspg5Q71M36 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Cspg5Q71M36 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cspg5Q71M36 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cspg5Q71M36 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms