Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Scn10aQ6QIY3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Scn10aQ6QIY3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Scn10aQ6QIY3 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn10aQ6QIY3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
Scn10aQ6QIY3 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn10aQ6QIY3 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn10aQ6QIY3 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn10aQ6QIY3 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Scn10aQ6QIY3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn10aQ6QIY3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn10aQ6QIY3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn10aQ6QIY3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Scn10aQ6QIY3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn10aQ6QIY3 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Scn10aQ6QIY3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Scn10aQ6QIY3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Scn10aQ6QIY3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Scn10aQ6QIY3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Scn10aQ6QIY3 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Scn10aQ6QIY3 Gm15165-201ENSMUST00000118140 502 ntBASIC19.52■□□□□ 0.71
Scn10aQ6QIY3 Gm13312-201ENSMUST00000119631 718 ntBASIC19.52■□□□□ 0.71
Scn10aQ6QIY3 Gm1401-201ENSMUST00000122048 772 ntBASIC19.52■□□□□ 0.71
Scn10aQ6QIY3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Scn10aQ6QIY3 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn10aQ6QIY3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn10aQ6QIY3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn10aQ6QIY3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.51■□□□□ 0.71
Scn10aQ6QIY3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Scn10aQ6QIY3 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn10aQ6QIY3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
Scn10aQ6QIY3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn10aQ6QIY3 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Scn10aQ6QIY3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn10aQ6QIY3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn10aQ6QIY3 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn10aQ6QIY3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC19.51■□□□□ 0.71
Scn10aQ6QIY3 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn10aQ6QIY3 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.51■□□□□ 0.71
Scn10aQ6QIY3 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn10aQ6QIY3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn10aQ6QIY3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn10aQ6QIY3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.5■□□□□ 0.71
Scn10aQ6QIY3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn10aQ6QIY3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Scn10aQ6QIY3 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Scn10aQ6QIY3 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.5■□□□□ 0.71
Scn10aQ6QIY3 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn10aQ6QIY3 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn10aQ6QIY3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn10aQ6QIY3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Scn10aQ6QIY3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.5■□□□□ 0.71
Scn10aQ6QIY3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn10aQ6QIY3 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Scn10aQ6QIY3 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn10aQ6QIY3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn10aQ6QIY3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn10aQ6QIY3 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scn10aQ6QIY3 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scn10aQ6QIY3 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn10aQ6QIY3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn10aQ6QIY3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn10aQ6QIY3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scn10aQ6QIY3 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC19.49■□□□□ 0.71
Scn10aQ6QIY3 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Scn10aQ6QIY3 Gm10060-201ENSMUST00000212002 111 ntBASIC19.49■□□□□ 0.71
Scn10aQ6QIY3 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn10aQ6QIY3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.49■□□□□ 0.71
Scn10aQ6QIY3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.49■□□□□ 0.71
Scn10aQ6QIY3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn10aQ6QIY3 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scn10aQ6QIY3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn10aQ6QIY3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Scn10aQ6QIY3 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC19.48■□□□□ 0.71
Scn10aQ6QIY3 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn10aQ6QIY3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Scn10aQ6QIY3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn10aQ6QIY3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn10aQ6QIY3 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn10aQ6QIY3 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn10aQ6QIY3 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.48■□□□□ 0.71
Scn10aQ6QIY3 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn10aQ6QIY3 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Scn10aQ6QIY3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn10aQ6QIY3 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Scn10aQ6QIY3 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Scn10aQ6QIY3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn10aQ6QIY3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Scn10aQ6QIY3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn10aQ6QIY3 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn10aQ6QIY3 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn10aQ6QIY3 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.47■□□□□ 0.71
Scn10aQ6QIY3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.47■□□□□ 0.71
Scn10aQ6QIY3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn10aQ6QIY3 Gm7862-201ENSMUST00000121461 292 ntBASIC19.47■□□□□ 0.71
Scn10aQ6QIY3 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC19.47■□□□□ 0.71
Scn10aQ6QIY3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn10aQ6QIY3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn10aQ6QIY3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Scn10aQ6QIY3 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms