Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Abcf1Q6P542 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Abcf1Q6P542 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Abcf1Q6P542 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Abcf1Q6P542 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Abcf1Q6P542 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Abcf1Q6P542 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Abcf1Q6P542 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Abcf1Q6P542 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Abcf1Q6P542 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Abcf1Q6P542 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Abcf1Q6P542 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.28■□□□□ 0.68
Abcf1Q6P542 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Abcf1Q6P542 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Abcf1Q6P542 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Abcf1Q6P542 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Abcf1Q6P542 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Abcf1Q6P542 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.27■□□□□ 0.68
Abcf1Q6P542 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Abcf1Q6P542 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Abcf1Q6P542 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Abcf1Q6P542 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Abcf1Q6P542 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Abcf1Q6P542 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Abcf1Q6P542 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Abcf1Q6P542 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Abcf1Q6P542 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Abcf1Q6P542 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Abcf1Q6P542 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Abcf1Q6P542 Trmt13-210ENSMUST00000198454 880 ntBASIC19.27■□□□□ 0.68
Abcf1Q6P542 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.27■□□□□ 0.68
Abcf1Q6P542 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Abcf1Q6P542 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.27■□□□□ 0.68
Abcf1Q6P542 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Abcf1Q6P542 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Abcf1Q6P542 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Abcf1Q6P542 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Abcf1Q6P542 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Abcf1Q6P542 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Abcf1Q6P542 Mir8112-201ENSMUST00000184382 131 ntBASIC19.26■□□□□ 0.67
Abcf1Q6P542 Gm37856-201ENSMUST00000191634 999 ntBASIC19.26■□□□□ 0.67
Abcf1Q6P542 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Abcf1Q6P542 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Abcf1Q6P542 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Abcf1Q6P542 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Abcf1Q6P542 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Abcf1Q6P542 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Abcf1Q6P542 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Abcf1Q6P542 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Abcf1Q6P542 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Abcf1Q6P542 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Abcf1Q6P542 Gm2399-201ENSMUST00000104944 225 ntBASIC19.25■□□□□ 0.67
Abcf1Q6P542 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Abcf1Q6P542 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Abcf1Q6P542 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Abcf1Q6P542 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Abcf1Q6P542 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.25■□□□□ 0.67
Abcf1Q6P542 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Abcf1Q6P542 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Abcf1Q6P542 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Abcf1Q6P542 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.25■□□□□ 0.67
Abcf1Q6P542 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Abcf1Q6P542 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Abcf1Q6P542 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Abcf1Q6P542 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Abcf1Q6P542 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Abcf1Q6P542 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Abcf1Q6P542 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.24■□□□□ 0.67
Abcf1Q6P542 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.24■□□□□ 0.67
Abcf1Q6P542 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Abcf1Q6P542 Gm8520-201ENSMUST00000186517 868 ntBASIC19.24■□□□□ 0.67
Abcf1Q6P542 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Abcf1Q6P542 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Abcf1Q6P542 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Abcf1Q6P542 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Abcf1Q6P542 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Abcf1Q6P542 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Abcf1Q6P542 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Abcf1Q6P542 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.23■□□□□ 0.67
Abcf1Q6P542 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Abcf1Q6P542 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Abcf1Q6P542 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Abcf1Q6P542 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Abcf1Q6P542 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Abcf1Q6P542 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Abcf1Q6P542 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Abcf1Q6P542 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Abcf1Q6P542 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Abcf1Q6P542 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Abcf1Q6P542 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.23■□□□□ 0.67
Abcf1Q6P542 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Abcf1Q6P542 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Abcf1Q6P542 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Abcf1Q6P542 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Abcf1Q6P542 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Abcf1Q6P542 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Abcf1Q6P542 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Abcf1Q6P542 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Abcf1Q6P542 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.23■□□□□ 0.67
Abcf1Q6P542 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms