Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac4Q6NZM9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac4Q6NZM9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac4Q6NZM9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac4Q6NZM9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac4Q6NZM9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac4Q6NZM9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Hdac4Q6NZM9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.24■□□□□ 0.67
Hdac4Q6NZM9 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.24■□□□□ 0.67
Hdac4Q6NZM9 Gm38027-201ENSMUST00000192315 235 ntBASIC19.24■□□□□ 0.67
Hdac4Q6NZM9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac4Q6NZM9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Hdac4Q6NZM9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Hdac4Q6NZM9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac4Q6NZM9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Hdac4Q6NZM9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac4Q6NZM9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac4Q6NZM9 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.24■□□□□ 0.67
Hdac4Q6NZM9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Hdac4Q6NZM9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac4Q6NZM9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Hdac4Q6NZM9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac4Q6NZM9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac4Q6NZM9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hdac4Q6NZM9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hdac4Q6NZM9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Hdac4Q6NZM9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hdac4Q6NZM9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hdac4Q6NZM9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hdac4Q6NZM9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.23■□□□□ 0.67
Hdac4Q6NZM9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hdac4Q6NZM9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.23■□□□□ 0.67
Hdac4Q6NZM9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.23■□□□□ 0.67
Hdac4Q6NZM9 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hdac4Q6NZM9 Gm22240-201ENSMUST00000175225 82 ntBASIC19.23■□□□□ 0.67
Hdac4Q6NZM9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hdac4Q6NZM9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hdac4Q6NZM9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hdac4Q6NZM9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hdac4Q6NZM9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hdac4Q6NZM9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hdac4Q6NZM9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hdac4Q6NZM9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Hdac4Q6NZM9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.23■□□□□ 0.67
Hdac4Q6NZM9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.23■□□□□ 0.67
Hdac4Q6NZM9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Hdac4Q6NZM9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Hdac4Q6NZM9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac4Q6NZM9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Hdac4Q6NZM9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac4Q6NZM9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac4Q6NZM9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac4Q6NZM9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac4Q6NZM9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac4Q6NZM9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac4Q6NZM9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac4Q6NZM9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.22■□□□□ 0.67
Hdac4Q6NZM9 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac4Q6NZM9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.22■□□□□ 0.67
Hdac4Q6NZM9 Gm9731-201ENSMUST00000209480 747 ntBASIC19.22■□□□□ 0.67
Hdac4Q6NZM9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac4Q6NZM9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac4Q6NZM9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac4Q6NZM9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac4Q6NZM9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac4Q6NZM9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Hdac4Q6NZM9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac4Q6NZM9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac4Q6NZM9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac4Q6NZM9 Gm715-201ENSMUST00000117865 831 ntBASIC19.21■□□□□ 0.67
Hdac4Q6NZM9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Hdac4Q6NZM9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.21■□□□□ 0.67
Hdac4Q6NZM9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.21■□□□□ 0.67
Hdac4Q6NZM9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.21■□□□□ 0.67
Hdac4Q6NZM9 Timm23-208ENSMUST00000226683 750 ntBASIC19.21■□□□□ 0.67
Hdac4Q6NZM9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac4Q6NZM9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Hdac4Q6NZM9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac4Q6NZM9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac4Q6NZM9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac4Q6NZM9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac4Q6NZM9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.21■□□□□ 0.67
Hdac4Q6NZM9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Hdac4Q6NZM9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac4Q6NZM9 Gm7638-201ENSMUST00000121348 967 ntBASIC19.2■□□□□ 0.66
Hdac4Q6NZM9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac4Q6NZM9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Hdac4Q6NZM9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac4Q6NZM9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac4Q6NZM9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Hdac4Q6NZM9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac4Q6NZM9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac4Q6NZM9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac4Q6NZM9 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.19■□□□□ 0.66
Hdac4Q6NZM9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac4Q6NZM9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Hdac4Q6NZM9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac4Q6NZM9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac4Q6NZM9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac4Q6NZM9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms