Protein–RNA interactions for Protein: Q6A078

Cep290, Centrosomal protein of 290 kDa, mousemouse

Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cep290Q6A078 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cep290Q6A078 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cep290Q6A078 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cep290Q6A078 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.41
Cep290Q6A078 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cep290Q6A078 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cep290Q6A078 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cep290Q6A078 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cep290Q6A078 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Cep290Q6A078 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cep290Q6A078 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cep290Q6A078 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cep290Q6A078 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cep290Q6A078 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.58■□□□□ 0.4
Cep290Q6A078 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.58■□□□□ 0.4
Cep290Q6A078 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.58■□□□□ 0.4
Cep290Q6A078 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.58■□□□□ 0.4
Cep290Q6A078 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Cep290Q6A078 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cep290Q6A078 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Cep290Q6A078 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cep290Q6A078 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cep290Q6A078 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cep290Q6A078 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cep290Q6A078 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cep290Q6A078 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.57■□□□□ 0.4
Cep290Q6A078 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cep290Q6A078 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cep290Q6A078 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cep290Q6A078 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Cep290Q6A078 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cep290Q6A078 Gm14140-201ENSMUST00000119999 995 ntBASIC17.57■□□□□ 0.4
Cep290Q6A078 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.57■□□□□ 0.4
Cep290Q6A078 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.57■□□□□ 0.4
Cep290Q6A078 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cep290Q6A078 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cep290Q6A078 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC17.57■□□□□ 0.4
Cep290Q6A078 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cep290Q6A078 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cep290Q6A078 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.57■□□□□ 0.4
Cep290Q6A078 Grk6-206ENSMUST00000224995 2971 ntBASIC17.57■□□□□ 0.4
Cep290Q6A078 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cep290Q6A078 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.56■□□□□ 0.4
Cep290Q6A078 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.56■□□□□ 0.4
Cep290Q6A078 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cep290Q6A078 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cep290Q6A078 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cep290Q6A078 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cep290Q6A078 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cep290Q6A078 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.56■□□□□ 0.4
Cep290Q6A078 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cep290Q6A078 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cep290Q6A078 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Cep290Q6A078 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cep290Q6A078 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cep290Q6A078 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cep290Q6A078 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cep290Q6A078 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cep290Q6A078 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cep290Q6A078 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cep290Q6A078 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cep290Q6A078 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cep290Q6A078 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cep290Q6A078 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.55■□□□□ 0.4
Cep290Q6A078 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cep290Q6A078 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Cep290Q6A078 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cep290Q6A078 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cep290Q6A078 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cep290Q6A078 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cep290Q6A078 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.55■□□□□ 0.4
Cep290Q6A078 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.55■□□□□ 0.4
Cep290Q6A078 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cep290Q6A078 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cep290Q6A078 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cep290Q6A078 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cep290Q6A078 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cep290Q6A078 Gm26308-201ENSMUST00000157768 69 ntBASIC17.54■□□□□ 0.4
Cep290Q6A078 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cep290Q6A078 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.54■□□□□ 0.4
Cep290Q6A078 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.54■□□□□ 0.4
Cep290Q6A078 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cep290Q6A078 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cep290Q6A078 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cep290Q6A078 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cep290Q6A078 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cep290Q6A078 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cep290Q6A078 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cep290Q6A078 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.54■□□□□ 0.4
Cep290Q6A078 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Cep290Q6A078 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
Cep290Q6A078 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cep290Q6A078 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cep290Q6A078 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cep290Q6A078 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cep290Q6A078 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cep290Q6A078 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cep290Q6A078 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cep290Q6A078 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cep290Q6A078 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms