Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Scube3Q66PY1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scube3Q66PY1 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Scube3Q66PY1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Scube3Q66PY1 Gm6433-201ENSMUST00000118634 875 ntBASIC18.06■□□□□ 0.48
Scube3Q66PY1 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Scube3Q66PY1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.06■□□□□ 0.48
Scube3Q66PY1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Scube3Q66PY1 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scube3Q66PY1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scube3Q66PY1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Scube3Q66PY1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Scube3Q66PY1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Scube3Q66PY1 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.06■□□□□ 0.48
Scube3Q66PY1 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scube3Q66PY1 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Scube3Q66PY1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scube3Q66PY1 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scube3Q66PY1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Scube3Q66PY1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scube3Q66PY1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scube3Q66PY1 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Scube3Q66PY1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scube3Q66PY1 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Scube3Q66PY1 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Scube3Q66PY1 Il3ra-202ENSMUST00000223589 738 ntBASIC18.05■□□□□ 0.48
Scube3Q66PY1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scube3Q66PY1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scube3Q66PY1 Gm9987-201ENSMUST00000069768 567 ntBASIC18.05■□□□□ 0.48
Scube3Q66PY1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scube3Q66PY1 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.05■□□□□ 0.48
Scube3Q66PY1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scube3Q66PY1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Scube3Q66PY1 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scube3Q66PY1 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scube3Q66PY1 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.05■□□□□ 0.48
Scube3Q66PY1 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scube3Q66PY1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scube3Q66PY1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scube3Q66PY1 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.04■□□□□ 0.48
Scube3Q66PY1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scube3Q66PY1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scube3Q66PY1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Scube3Q66PY1 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.04■□□□□ 0.48
Scube3Q66PY1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scube3Q66PY1 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Scube3Q66PY1 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Scube3Q66PY1 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Scube3Q66PY1 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Scube3Q66PY1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.04■□□□□ 0.48
Scube3Q66PY1 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Scube3Q66PY1 Gm7889-201ENSMUST00000185591 958 ntBASIC18.04■□□□□ 0.48
Scube3Q66PY1 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Scube3Q66PY1 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Scube3Q66PY1 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.04■□□□□ 0.48
Scube3Q66PY1 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.04■□□□□ 0.48
Scube3Q66PY1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Scube3Q66PY1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scube3Q66PY1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scube3Q66PY1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scube3Q66PY1 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scube3Q66PY1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.03■□□□□ 0.48
Scube3Q66PY1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Scube3Q66PY1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Scube3Q66PY1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Scube3Q66PY1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scube3Q66PY1 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scube3Q66PY1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scube3Q66PY1 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Scube3Q66PY1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Scube3Q66PY1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Scube3Q66PY1 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scube3Q66PY1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scube3Q66PY1 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Scube3Q66PY1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scube3Q66PY1 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scube3Q66PY1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Scube3Q66PY1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scube3Q66PY1 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Scube3Q66PY1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scube3Q66PY1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Scube3Q66PY1 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Scube3Q66PY1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.02■□□□□ 0.48
Scube3Q66PY1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scube3Q66PY1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Scube3Q66PY1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Scube3Q66PY1 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Scube3Q66PY1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Scube3Q66PY1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Scube3Q66PY1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Scube3Q66PY1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scube3Q66PY1 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scube3Q66PY1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scube3Q66PY1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scube3Q66PY1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scube3Q66PY1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Scube3Q66PY1 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.01■□□□□ 0.47
Scube3Q66PY1 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.01■□□□□ 0.47
Scube3Q66PY1 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Scube3Q66PY1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms