Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six3Q62233 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six3Q62233 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six3Q62233 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six3Q62233 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six3Q62233 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six3Q62233 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six3Q62233 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six3Q62233 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Six3Q62233 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six3Q62233 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Six3Q62233 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six3Q62233 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six3Q62233 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six3Q62233 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six3Q62233 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Six3Q62233 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six3Q62233 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six3Q62233 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.82■□□□□ 0.28
Six3Q62233 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.82■□□□□ 0.28
Six3Q62233 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six3Q62233 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six3Q62233 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six3Q62233 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Six3Q62233 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Six3Q62233 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six3Q62233 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.82■□□□□ 0.28
Six3Q62233 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.82■□□□□ 0.28
Six3Q62233 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Six3Q62233 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.82■□□□□ 0.28
Six3Q62233 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.82■□□□□ 0.28
Six3Q62233 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.82■□□□□ 0.28
Six3Q62233 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six3Q62233 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six3Q62233 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six3Q62233 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six3Q62233 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six3Q62233 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six3Q62233 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Six3Q62233 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six3Q62233 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six3Q62233 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six3Q62233 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six3Q62233 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.81■□□□□ 0.28
Six3Q62233 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Six3Q62233 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six3Q62233 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Six3Q62233 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six3Q62233 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Six3Q62233 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Six3Q62233 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six3Q62233 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six3Q62233 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six3Q62233 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six3Q62233 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six3Q62233 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six3Q62233 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Six3Q62233 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six3Q62233 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.8■□□□□ 0.28
Six3Q62233 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six3Q62233 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six3Q62233 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Six3Q62233 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six3Q62233 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six3Q62233 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six3Q62233 Gm12527-201ENSMUST00000117967 564 ntBASIC16.8■□□□□ 0.28
Six3Q62233 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six3Q62233 Gm37292-201ENSMUST00000192062 758 ntBASIC16.8■□□□□ 0.28
Six3Q62233 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six3Q62233 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.8■□□□□ 0.28
Six3Q62233 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six3Q62233 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six3Q62233 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six3Q62233 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Six3Q62233 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.79■□□□□ 0.28
Six3Q62233 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.79■□□□□ 0.28
Six3Q62233 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Six3Q62233 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Six3Q62233 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six3Q62233 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.79■□□□□ 0.28
Six3Q62233 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Six3Q62233 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six3Q62233 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Six3Q62233 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six3Q62233 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Six3Q62233 Gm37856-201ENSMUST00000191634 999 ntBASIC16.79■□□□□ 0.28
Six3Q62233 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.79■□□□□ 0.28
Six3Q62233 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six3Q62233 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Six3Q62233 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six3Q62233 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six3Q62233 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six3Q62233 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six3Q62233 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six3Q62233 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six3Q62233 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.78■□□□□ 0.28
Six3Q62233 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Six3Q62233 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six3Q62233 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six3Q62233 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms