Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Six2Q62232 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Six2Q62232 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Six2Q62232 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Six2Q62232 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.31■□□□□ 0.52
Six2Q62232 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Six2Q62232 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.31■□□□□ 0.52
Six2Q62232 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.31■□□□□ 0.52
Six2Q62232 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Six2Q62232 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.31■□□□□ 0.52
Six2Q62232 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Six2Q62232 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Six2Q62232 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Six2Q62232 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Six2Q62232 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Six2Q62232 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Six2Q62232 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Six2Q62232 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Six2Q62232 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Six2Q62232 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.31■□□□□ 0.52
Six2Q62232 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Six2Q62232 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.31■□□□□ 0.52
Six2Q62232 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.31■□□□□ 0.52
Six2Q62232 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Six2Q62232 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Six2Q62232 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Six2Q62232 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Six2Q62232 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Six2Q62232 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
Six2Q62232 Gm7638-201ENSMUST00000121348 967 ntBASIC18.3■□□□□ 0.52
Six2Q62232 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Six2Q62232 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.3■□□□□ 0.52
Six2Q62232 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Six2Q62232 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Six2Q62232 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Six2Q62232 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Six2Q62232 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Six2Q62232 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Six2Q62232 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Six2Q62232 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Six2Q62232 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Six2Q62232 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Six2Q62232 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Six2Q62232 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Six2Q62232 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.29■□□□□ 0.52
Six2Q62232 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.29■□□□□ 0.52
Six2Q62232 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Six2Q62232 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Six2Q62232 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Six2Q62232 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Six2Q62232 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Six2Q62232 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Six2Q62232 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Six2Q62232 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Six2Q62232 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.29■□□□□ 0.52
Six2Q62232 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.29■□□□□ 0.52
Six2Q62232 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.29■□□□□ 0.52
Six2Q62232 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.28■□□□□ 0.52
Six2Q62232 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Six2Q62232 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Six2Q62232 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Six2Q62232 Gm13216-201ENSMUST00000117145 591 ntBASIC18.28■□□□□ 0.52
Six2Q62232 Gm715-201ENSMUST00000117865 831 ntBASIC18.28■□□□□ 0.52
Six2Q62232 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Six2Q62232 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Six2Q62232 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Six2Q62232 Gm9731-201ENSMUST00000209480 747 ntBASIC18.28■□□□□ 0.52
Six2Q62232 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Six2Q62232 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Six2Q62232 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Six2Q62232 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.28■□□□□ 0.52
Six2Q62232 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Six2Q62232 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Six2Q62232 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Six2Q62232 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Six2Q62232 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Six2Q62232 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.27■□□□□ 0.52
Six2Q62232 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.27■□□□□ 0.52
Six2Q62232 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.27■□□□□ 0.52
Six2Q62232 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.27■□□□□ 0.52
Six2Q62232 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Six2Q62232 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Six2Q62232 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Six2Q62232 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Six2Q62232 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Six2Q62232 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Six2Q62232 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Six2Q62232 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.27■□□□□ 0.51
Six2Q62232 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six2Q62232 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six2Q62232 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six2Q62232 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six2Q62232 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Six2Q62232 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six2Q62232 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six2Q62232 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six2Q62232 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six2Q62232 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six2Q62232 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six2Q62232 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms