Protein–RNA interactions for Protein: Q62209

Sycp1, Synaptonemal complex protein 1, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sycp1Q62209 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sycp1Q62209 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Sycp1Q62209 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sycp1Q62209 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sycp1Q62209 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sycp1Q62209 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sycp1Q62209 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Sycp1Q62209 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Sycp1Q62209 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.29■□□□□ 0.68
Sycp1Q62209 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sycp1Q62209 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Sycp1Q62209 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.29■□□□□ 0.68
Sycp1Q62209 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sycp1Q62209 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
Sycp1Q62209 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sycp1Q62209 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Sycp1Q62209 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sycp1Q62209 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.29■□□□□ 0.68
Sycp1Q62209 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sycp1Q62209 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sycp1Q62209 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sycp1Q62209 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sycp1Q62209 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sycp1Q62209 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sycp1Q62209 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sycp1Q62209 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sycp1Q62209 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sycp1Q62209 Gm11643-201ENSMUST00000119578 864 ntBASIC19.28■□□□□ 0.68
Sycp1Q62209 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Sycp1Q62209 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sycp1Q62209 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.28■□□□□ 0.68
Sycp1Q62209 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sycp1Q62209 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sycp1Q62209 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sycp1Q62209 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sycp1Q62209 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sycp1Q62209 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sycp1Q62209 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sycp1Q62209 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sycp1Q62209 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sycp1Q62209 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sycp1Q62209 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sycp1Q62209 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sycp1Q62209 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sycp1Q62209 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sycp1Q62209 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sycp1Q62209 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.27■□□□□ 0.68
Sycp1Q62209 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sycp1Q62209 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.27■□□□□ 0.68
Sycp1Q62209 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.27■□□□□ 0.68
Sycp1Q62209 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.27■□□□□ 0.68
Sycp1Q62209 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.27■□□□□ 0.68
Sycp1Q62209 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sycp1Q62209 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sycp1Q62209 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.27■□□□□ 0.68
Sycp1Q62209 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.27■□□□□ 0.67
Sycp1Q62209 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sycp1Q62209 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Sycp1Q62209 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Sycp1Q62209 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.27■□□□□ 0.67
Sycp1Q62209 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sycp1Q62209 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sycp1Q62209 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.26■□□□□ 0.67
Sycp1Q62209 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.26■□□□□ 0.67
Sycp1Q62209 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sycp1Q62209 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sycp1Q62209 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sycp1Q62209 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sycp1Q62209 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.26■□□□□ 0.67
Sycp1Q62209 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sycp1Q62209 Mir1199-201ENSMUST00000117015 119 ntBASIC19.26■□□□□ 0.67
Sycp1Q62209 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sycp1Q62209 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.26■□□□□ 0.67
Sycp1Q62209 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.26■□□□□ 0.67
Sycp1Q62209 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sycp1Q62209 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sycp1Q62209 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sycp1Q62209 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sycp1Q62209 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sycp1Q62209 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sycp1Q62209 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sycp1Q62209 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sycp1Q62209 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sycp1Q62209 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sycp1Q62209 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sycp1Q62209 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Sycp1Q62209 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.25■□□□□ 0.67
Sycp1Q62209 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sycp1Q62209 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sycp1Q62209 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sycp1Q62209 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sycp1Q62209 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.25■□□□□ 0.67
Sycp1Q62209 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sycp1Q62209 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Sycp1Q62209 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Sycp1Q62209 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sycp1Q62209 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Sycp1Q62209 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sycp1Q62209 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Sycp1Q62209 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms