Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim27Q62158 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim27Q62158 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim27Q62158 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim27Q62158 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim27Q62158 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Trim27Q62158 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim27Q62158 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC21.13■□□□□ 0.97
Trim27Q62158 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim27Q62158 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC21.12■□□□□ 0.97
Trim27Q62158 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trim27Q62158 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim27Q62158 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC21.12■□□□□ 0.97
Trim27Q62158 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.12■□□□□ 0.97
Trim27Q62158 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim27Q62158 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim27Q62158 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim27Q62158 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim27Q62158 Gm11841-201ENSMUST00000117060 1963 ntBASIC21.12■□□□□ 0.97
Trim27Q62158 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim27Q62158 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim27Q62158 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trim27Q62158 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim27Q62158 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim27Q62158 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim27Q62158 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim27Q62158 Gm16401-202ENSMUST00000197463 2074 ntBASIC21.11■□□□□ 0.97
Trim27Q62158 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim27Q62158 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim27Q62158 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim27Q62158 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC21.11■□□□□ 0.97
Trim27Q62158 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC21.11■□□□□ 0.97
Trim27Q62158 Gm7791-201ENSMUST00000219066 539 ntBASIC21.11■□□□□ 0.97
Trim27Q62158 Il3ra-202ENSMUST00000223589 738 ntBASIC21.11■□□□□ 0.97
Trim27Q62158 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim27Q62158 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trim27Q62158 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trim27Q62158 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim27Q62158 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim27Q62158 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim27Q62158 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim27Q62158 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim27Q62158 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim27Q62158 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim27Q62158 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.1■□□□□ 0.97
Trim27Q62158 Gm9484-201ENSMUST00000195892 1159 ntBASIC21.1■□□□□ 0.97
Trim27Q62158 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.1■□□□□ 0.97
Trim27Q62158 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim27Q62158 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC21.1■□□□□ 0.97
Trim27Q62158 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim27Q62158 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim27Q62158 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim27Q62158 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Trim27Q62158 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim27Q62158 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim27Q62158 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim27Q62158 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim27Q62158 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim27Q62158 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim27Q62158 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim27Q62158 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC21.09■□□□□ 0.97
Trim27Q62158 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim27Q62158 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Trim27Q62158 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.09■□□□□ 0.97
Trim27Q62158 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
Trim27Q62158 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC21.09■□□□□ 0.97
Trim27Q62158 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim27Q62158 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim27Q62158 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim27Q62158 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim27Q62158 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim27Q62158 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim27Q62158 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Trim27Q62158 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim27Q62158 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Trim27Q62158 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC21.08■□□□□ 0.97
Trim27Q62158 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim27Q62158 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC21.08■□□□□ 0.97
Trim27Q62158 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC21.08■□□□□ 0.97
Trim27Q62158 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim27Q62158 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim27Q62158 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.96
Trim27Q62158 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC21.08■□□□□ 0.96
Trim27Q62158 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim27Q62158 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim27Q62158 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim27Q62158 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Trim27Q62158 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim27Q62158 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Trim27Q62158 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim27Q62158 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Trim27Q62158 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim27Q62158 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trim27Q62158 Gm27000-201ENSMUST00000182943 842 ntBASIC21.07■□□□□ 0.96
Trim27Q62158 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim27Q62158 AC120002.2-201ENSMUST00000220205 773 ntBASIC21.07■□□□□ 0.96
Trim27Q62158 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Trim27Q62158 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim27Q62158 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim27Q62158 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms