Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
VcanQ62059 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VcanQ62059 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VcanQ62059 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
VcanQ62059 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VcanQ62059 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VcanQ62059 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VcanQ62059 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VcanQ62059 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
VcanQ62059 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VcanQ62059 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.18■□□□□ 0.18
VcanQ62059 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VcanQ62059 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
VcanQ62059 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VcanQ62059 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.17■□□□□ 0.18
VcanQ62059 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VcanQ62059 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.17■□□□□ 0.18
VcanQ62059 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VcanQ62059 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VcanQ62059 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.17■□□□□ 0.18
VcanQ62059 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.17■□□□□ 0.18
VcanQ62059 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.17■□□□□ 0.18
VcanQ62059 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VcanQ62059 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.17■□□□□ 0.18
VcanQ62059 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VcanQ62059 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VcanQ62059 Gm13401-201ENSMUST00000117074 291 ntBASIC16.17■□□□□ 0.18
VcanQ62059 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.17■□□□□ 0.18
VcanQ62059 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
VcanQ62059 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VcanQ62059 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VcanQ62059 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
VcanQ62059 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VcanQ62059 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.16■□□□□ 0.18
VcanQ62059 Gm9731-201ENSMUST00000209480 747 ntBASIC16.16■□□□□ 0.18
VcanQ62059 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VcanQ62059 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.16■□□□□ 0.18
VcanQ62059 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VcanQ62059 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VcanQ62059 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
VcanQ62059 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VcanQ62059 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
VcanQ62059 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
VcanQ62059 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.16■□□□□ 0.18
VcanQ62059 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
VcanQ62059 Gm6296-201ENSMUST00000222599 943 ntBASIC16.16■□□□□ 0.18
VcanQ62059 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VcanQ62059 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VcanQ62059 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
VcanQ62059 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VcanQ62059 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VcanQ62059 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VcanQ62059 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
VcanQ62059 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VcanQ62059 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.15■□□□□ 0.18
VcanQ62059 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
VcanQ62059 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
VcanQ62059 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VcanQ62059 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.15■□□□□ 0.18
VcanQ62059 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VcanQ62059 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VcanQ62059 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.15■□□□□ 0.18
VcanQ62059 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.15■□□□□ 0.18
VcanQ62059 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VcanQ62059 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
VcanQ62059 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
VcanQ62059 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VcanQ62059 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VcanQ62059 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VcanQ62059 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.15■□□□□ 0.18
VcanQ62059 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
VcanQ62059 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VcanQ62059 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.15■□□□□ 0.18
VcanQ62059 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
VcanQ62059 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.14■□□□□ 0.17
VcanQ62059 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VcanQ62059 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
VcanQ62059 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
VcanQ62059 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VcanQ62059 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VcanQ62059 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VcanQ62059 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VcanQ62059 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
VcanQ62059 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VcanQ62059 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VcanQ62059 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VcanQ62059 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VcanQ62059 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VcanQ62059 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VcanQ62059 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.14■□□□□ 0.17
VcanQ62059 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VcanQ62059 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.13■□□□□ 0.17
VcanQ62059 Gm24841-201ENSMUST00000158676 357 ntBASIC16.13■□□□□ 0.17
VcanQ62059 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VcanQ62059 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VcanQ62059 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
VcanQ62059 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VcanQ62059 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
VcanQ62059 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VcanQ62059 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms