Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Foxc1Q61572 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC12.63□□□□□ -0.39
Foxc1Q61572 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Foxc1Q61572 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Foxc1Q61572 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Foxc1Q61572 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Foxc1Q61572 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.63□□□□□ -0.39
Foxc1Q61572 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxc1Q61572 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12.62□□□□□ -0.39
Foxc1Q61572 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxc1Q61572 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxc1Q61572 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC12.62□□□□□ -0.39
Foxc1Q61572 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Foxc1Q61572 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxc1Q61572 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxc1Q61572 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxc1Q61572 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxc1Q61572 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Foxc1Q61572 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Foxc1Q61572 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Foxc1Q61572 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.62□□□□□ -0.39
Foxc1Q61572 Gm12382-201ENSMUST00000122005 922 ntBASIC12.62□□□□□ -0.39
Foxc1Q61572 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Foxc1Q61572 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxc1Q61572 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Foxc1Q61572 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxc1Q61572 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Foxc1Q61572 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
Foxc1Q61572 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Foxc1Q61572 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC12.62□□□□□ -0.39
Foxc1Q61572 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxc1Q61572 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxc1Q61572 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxc1Q61572 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Foxc1Q61572 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Foxc1Q61572 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Foxc1Q61572 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Foxc1Q61572 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxc1Q61572 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxc1Q61572 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Foxc1Q61572 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxc1Q61572 Gm45244-201ENSMUST00000211328 2200 ntBASIC12.61□□□□□ -0.39
Foxc1Q61572 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Foxc1Q61572 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC12.61□□□□□ -0.39
Foxc1Q61572 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Foxc1Q61572 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Foxc1Q61572 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxc1Q61572 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.61□□□□□ -0.39
Foxc1Q61572 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Foxc1Q61572 Mir1199-201ENSMUST00000117015 119 ntBASIC12.61□□□□□ -0.39
Foxc1Q61572 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC12.61□□□□□ -0.39
Foxc1Q61572 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Foxc1Q61572 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC12.61□□□□□ -0.39
Foxc1Q61572 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxc1Q61572 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC12.61□□□□□ -0.39
Foxc1Q61572 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Foxc1Q61572 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Foxc1Q61572 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxc1Q61572 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxc1Q61572 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Foxc1Q61572 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxc1Q61572 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxc1Q61572 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxc1Q61572 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Foxc1Q61572 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxc1Q61572 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Foxc1Q61572 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxc1Q61572 AC124581.1-201ENSMUST00000225416 1399 ntBASIC12.6□□□□□ -0.39
Foxc1Q61572 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxc1Q61572 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxc1Q61572 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxc1Q61572 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.6□□□□□ -0.39
Foxc1Q61572 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC12.6□□□□□ -0.39
Foxc1Q61572 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxc1Q61572 Gm15565-201ENSMUST00000118890 427 ntBASIC12.6□□□□□ -0.39
Foxc1Q61572 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Foxc1Q61572 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Foxc1Q61572 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Foxc1Q61572 Gm42545-201ENSMUST00000202755 922 ntBASIC12.6□□□□□ -0.39
Foxc1Q61572 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC12.6□□□□□ -0.39
Foxc1Q61572 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxc1Q61572 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxc1Q61572 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxc1Q61572 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxc1Q61572 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.6□□□□□ -0.39
Foxc1Q61572 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxc1Q61572 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxc1Q61572 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Foxc1Q61572 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxc1Q61572 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxc1Q61572 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Foxc1Q61572 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Foxc1Q61572 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxc1Q61572 Gm10654-201ENSMUST00000098653 1633 ntBASIC12.59□□□□□ -0.39
Foxc1Q61572 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxc1Q61572 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxc1Q61572 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxc1Q61572 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxc1Q61572 Dmtn-207ENSMUST00000228001 2437 ntBASIC12.59□□□□□ -0.39
Foxc1Q61572 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms