Protein–RNA interactions for Protein: Q61510

Trim25, E3 ubiquitin/ISG15 ligase TRIM25, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim25Q61510 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Trim25Q61510 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.72■□□□□ 0.59
Trim25Q61510 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim25Q61510 Gm13216-201ENSMUST00000117145 591 ntBASIC18.72■□□□□ 0.59
Trim25Q61510 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.72■□□□□ 0.59
Trim25Q61510 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Trim25Q61510 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.72■□□□□ 0.59
Trim25Q61510 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Trim25Q61510 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Trim25Q61510 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim25Q61510 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim25Q61510 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim25Q61510 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim25Q61510 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim25Q61510 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim25Q61510 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim25Q61510 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim25Q61510 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim25Q61510 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.71■□□□□ 0.59
Trim25Q61510 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.71■□□□□ 0.59
Trim25Q61510 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim25Q61510 Gm9988-201ENSMUST00000069786 435 ntBASIC18.71■□□□□ 0.59
Trim25Q61510 Reep4-203ENSMUST00000226563 1444 ntBASIC18.71■□□□□ 0.59
Trim25Q61510 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim25Q61510 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.71■□□□□ 0.59
Trim25Q61510 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim25Q61510 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
Trim25Q61510 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim25Q61510 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.7■□□□□ 0.58
Trim25Q61510 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trim25Q61510 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim25Q61510 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim25Q61510 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim25Q61510 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim25Q61510 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim25Q61510 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim25Q61510 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim25Q61510 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim25Q61510 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim25Q61510 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim25Q61510 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim25Q61510 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim25Q61510 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim25Q61510 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim25Q61510 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Trim25Q61510 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim25Q61510 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Trim25Q61510 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim25Q61510 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim25Q61510 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim25Q61510 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim25Q61510 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim25Q61510 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.69■□□□□ 0.58
Trim25Q61510 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim25Q61510 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim25Q61510 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim25Q61510 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Trim25Q61510 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.69■□□□□ 0.58
Trim25Q61510 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trim25Q61510 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim25Q61510 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim25Q61510 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim25Q61510 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim25Q61510 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim25Q61510 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim25Q61510 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim25Q61510 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim25Q61510 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trim25Q61510 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim25Q61510 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim25Q61510 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim25Q61510 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim25Q61510 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.68■□□□□ 0.58
Trim25Q61510 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim25Q61510 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.68■□□□□ 0.58
Trim25Q61510 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Trim25Q61510 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim25Q61510 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Trim25Q61510 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Trim25Q61510 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim25Q61510 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim25Q61510 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim25Q61510 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Trim25Q61510 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim25Q61510 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim25Q61510 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim25Q61510 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim25Q61510 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim25Q61510 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim25Q61510 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
Trim25Q61510 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim25Q61510 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim25Q61510 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim25Q61510 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim25Q61510 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim25Q61510 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim25Q61510 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim25Q61510 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim25Q61510 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim25Q61510 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms