Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
Sox17Q61473 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.19■□□□□ 0.18
Sox17Q61473 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox17Q61473 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Sox17Q61473 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.19■□□□□ 0.18
Sox17Q61473 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox17Q61473 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Sox17Q61473 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox17Q61473 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox17Q61473 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox17Q61473 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.19■□□□□ 0.18
Sox17Q61473 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox17Q61473 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox17Q61473 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.19■□□□□ 0.18
Sox17Q61473 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox17Q61473 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sox17Q61473 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox17Q61473 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox17Q61473 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox17Q61473 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Sox17Q61473 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox17Q61473 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox17Q61473 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Sox17Q61473 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox17Q61473 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.18■□□□□ 0.18
Sox17Q61473 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox17Q61473 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox17Q61473 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox17Q61473 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.18■□□□□ 0.18
Sox17Q61473 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox17Q61473 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox17Q61473 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox17Q61473 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Sox17Q61473 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox17Q61473 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.18■□□□□ 0.18
Sox17Q61473 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Sox17Q61473 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sox17Q61473 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox17Q61473 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Sox17Q61473 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox17Q61473 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox17Q61473 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox17Q61473 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox17Q61473 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Sox17Q61473 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox17Q61473 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Sox17Q61473 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox17Q61473 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox17Q61473 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox17Q61473 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox17Q61473 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Sox17Q61473 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.17■□□□□ 0.18
Sox17Q61473 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sox17Q61473 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox17Q61473 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.17■□□□□ 0.18
Sox17Q61473 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.17■□□□□ 0.18
Sox17Q61473 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.17■□□□□ 0.18
Sox17Q61473 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Sox17Q61473 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox17Q61473 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox17Q61473 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Sox17Q61473 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox17Q61473 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.17■□□□□ 0.18
Sox17Q61473 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Sox17Q61473 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Sox17Q61473 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sox17Q61473 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox17Q61473 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox17Q61473 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox17Q61473 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Sox17Q61473 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Sox17Q61473 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Sox17Q61473 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Sox17Q61473 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.16■□□□□ 0.18
Sox17Q61473 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Sox17Q61473 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox17Q61473 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox17Q61473 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox17Q61473 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox17Q61473 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox17Q61473 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox17Q61473 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Sox17Q61473 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox17Q61473 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox17Q61473 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox17Q61473 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox17Q61473 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox17Q61473 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox17Q61473 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox17Q61473 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.15■□□□□ 0.18
Sox17Q61473 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox17Q61473 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Sox17Q61473 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.15■□□□□ 0.18
Sox17Q61473 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.15■□□□□ 0.18
Sox17Q61473 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Sox17Q61473 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox17Q61473 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.15■□□□□ 0.18
Sox17Q61473 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Sox17Q61473 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Sox17Q61473 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 152.5 ms