Protein–RNA interactions for Protein: Q61329

Zfhx3, Zinc finger homeobox protein 3, mousemouse

Predictions only

Length 3,726 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfhx3Q61329 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.24■□□□□ 0.03
Zfhx3Q61329 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Zfhx3Q61329 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Zfhx3Q61329 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Zfhx3Q61329 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Zfhx3Q61329 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.24■□□□□ 0.03
Zfhx3Q61329 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zfhx3Q61329 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zfhx3Q61329 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zfhx3Q61329 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Zfhx3Q61329 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zfhx3Q61329 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zfhx3Q61329 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zfhx3Q61329 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zfhx3Q61329 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Zfhx3Q61329 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.23■□□□□ 0.03
Zfhx3Q61329 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.23■□□□□ 0.03
Zfhx3Q61329 Gm6296-201ENSMUST00000222599 943 ntBASIC15.23■□□□□ 0.03
Zfhx3Q61329 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zfhx3Q61329 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zfhx3Q61329 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zfhx3Q61329 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zfhx3Q61329 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zfhx3Q61329 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zfhx3Q61329 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zfhx3Q61329 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zfhx3Q61329 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Zfhx3Q61329 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Zfhx3Q61329 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Zfhx3Q61329 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Zfhx3Q61329 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.22■□□□□ 0.03
Zfhx3Q61329 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Zfhx3Q61329 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Zfhx3Q61329 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Zfhx3Q61329 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Zfhx3Q61329 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Zfhx3Q61329 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Zfhx3Q61329 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.22■□□□□ 0.03
Zfhx3Q61329 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Zfhx3Q61329 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Zfhx3Q61329 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Zfhx3Q61329 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Zfhx3Q61329 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Zfhx3Q61329 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Zfhx3Q61329 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Zfhx3Q61329 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Zfhx3Q61329 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Zfhx3Q61329 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Zfhx3Q61329 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.21■□□□□ 0.03
Zfhx3Q61329 Gm6376-201ENSMUST00000209407 580 ntBASIC15.21■□□□□ 0.03
Zfhx3Q61329 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Zfhx3Q61329 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Zfhx3Q61329 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Zfhx3Q61329 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Zfhx3Q61329 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Zfhx3Q61329 Gm13616-201ENSMUST00000120600 222 ntBASIC15.21■□□□□ 0.03
Zfhx3Q61329 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Zfhx3Q61329 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Zfhx3Q61329 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Zfhx3Q61329 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Zfhx3Q61329 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Zfhx3Q61329 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Zfhx3Q61329 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Zfhx3Q61329 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Zfhx3Q61329 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Zfhx3Q61329 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Zfhx3Q61329 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC15.2■□□□□ 0.02
Zfhx3Q61329 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.2■□□□□ 0.02
Zfhx3Q61329 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.2■□□□□ 0.02
Zfhx3Q61329 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.2■□□□□ 0.02
Zfhx3Q61329 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.2■□□□□ 0.02
Zfhx3Q61329 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.2■□□□□ 0.02
Zfhx3Q61329 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Zfhx3Q61329 Tgds-204ENSMUST00000228543 1594 ntBASIC15.2■□□□□ 0.02
Zfhx3Q61329 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Zfhx3Q61329 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Zfhx3Q61329 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Zfhx3Q61329 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Zfhx3Q61329 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Zfhx3Q61329 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Zfhx3Q61329 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.2■□□□□ 0.02
Zfhx3Q61329 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Zfhx3Q61329 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Zfhx3Q61329 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Zfhx3Q61329 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Zfhx3Q61329 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Zfhx3Q61329 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Zfhx3Q61329 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.2■□□□□ 0.02
Zfhx3Q61329 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Zfhx3Q61329 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Zfhx3Q61329 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Zfhx3Q61329 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Zfhx3Q61329 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.19■□□□□ 0.02
Zfhx3Q61329 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Zfhx3Q61329 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Zfhx3Q61329 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Zfhx3Q61329 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Zfhx3Q61329 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Zfhx3Q61329 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Zfhx3Q61329 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms