Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six4Q61321 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Six4Q61321 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six4Q61321 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Six4Q61321 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six4Q61321 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six4Q61321 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six4Q61321 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Six4Q61321 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.37■□□□□ 0.37
Six4Q61321 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six4Q61321 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Six4Q61321 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six4Q61321 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Six4Q61321 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six4Q61321 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Six4Q61321 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Six4Q61321 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Six4Q61321 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Six4Q61321 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six4Q61321 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.36■□□□□ 0.37
Six4Q61321 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six4Q61321 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.36■□□□□ 0.37
Six4Q61321 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Six4Q61321 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Six4Q61321 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.36■□□□□ 0.37
Six4Q61321 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.36■□□□□ 0.37
Six4Q61321 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six4Q61321 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six4Q61321 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six4Q61321 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Six4Q61321 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Six4Q61321 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Six4Q61321 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.36■□□□□ 0.37
Six4Q61321 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Six4Q61321 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Six4Q61321 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Six4Q61321 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
Six4Q61321 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.35■□□□□ 0.37
Six4Q61321 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.35■□□□□ 0.37
Six4Q61321 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Six4Q61321 Gm43799-201ENSMUST00000201845 579 ntBASIC17.35■□□□□ 0.37
Six4Q61321 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.35■□□□□ 0.37
Six4Q61321 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.35■□□□□ 0.37
Six4Q61321 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Six4Q61321 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Six4Q61321 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Six4Q61321 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Six4Q61321 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Six4Q61321 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Six4Q61321 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Six4Q61321 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Six4Q61321 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Six4Q61321 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six4Q61321 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.34■□□□□ 0.37
Six4Q61321 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Six4Q61321 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Six4Q61321 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.34■□□□□ 0.37
Six4Q61321 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six4Q61321 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six4Q61321 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six4Q61321 Gm13559-201ENSMUST00000120476 863 ntBASIC17.34■□□□□ 0.37
Six4Q61321 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.34■□□□□ 0.37
Six4Q61321 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Six4Q61321 Gm27463-201ENSMUST00000183569 57 ntBASIC17.34■□□□□ 0.37
Six4Q61321 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six4Q61321 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Six4Q61321 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six4Q61321 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six4Q61321 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six4Q61321 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Six4Q61321 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Six4Q61321 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.34■□□□□ 0.37
Six4Q61321 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Six4Q61321 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Six4Q61321 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Six4Q61321 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Six4Q61321 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Six4Q61321 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.33■□□□□ 0.37
Six4Q61321 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Six4Q61321 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
Six4Q61321 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Six4Q61321 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Six4Q61321 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Six4Q61321 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.33■□□□□ 0.36
Six4Q61321 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Six4Q61321 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Six4Q61321 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Six4Q61321 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Six4Q61321 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Six4Q61321 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Six4Q61321 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Six4Q61321 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Six4Q61321 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Six4Q61321 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six4Q61321 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six4Q61321 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six4Q61321 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Six4Q61321 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Six4Q61321 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Six4Q61321 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms