Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ptch1Q61115 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ptch1Q61115 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
Ptch1Q61115 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ptch1Q61115 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ptch1Q61115 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ptch1Q61115 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Ptch1Q61115 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ptch1Q61115 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ptch1Q61115 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Ptch1Q61115 AC154527.4-201ENSMUST00000224364 1667 ntBASIC24.86■■□□□ 1.57
Ptch1Q61115 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ptch1Q61115 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
Ptch1Q61115 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
Ptch1Q61115 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC24.86■■□□□ 1.57
Ptch1Q61115 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC24.86■■□□□ 1.57
Ptch1Q61115 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ptch1Q61115 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC24.85■■□□□ 1.57
Ptch1Q61115 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC24.85■■□□□ 1.57
Ptch1Q61115 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
Ptch1Q61115 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Ptch1Q61115 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ptch1Q61115 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC24.85■■□□□ 1.57
Ptch1Q61115 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC24.85■■□□□ 1.57
Ptch1Q61115 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC24.85■■□□□ 1.57
Ptch1Q61115 Gm6736-201ENSMUST00000166583 948 ntBASIC24.85■■□□□ 1.57
Ptch1Q61115 Gm18421-201ENSMUST00000204122 625 ntBASIC24.85■■□□□ 1.57
Ptch1Q61115 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC24.85■■□□□ 1.57
Ptch1Q61115 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ptch1Q61115 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC24.85■■□□□ 1.57
Ptch1Q61115 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Ptch1Q61115 Wnt10b-204ENSMUST00000226655 1807 ntBASIC24.84■■□□□ 1.57
Ptch1Q61115 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ptch1Q61115 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC24.84■■□□□ 1.57
Ptch1Q61115 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ptch1Q61115 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
Ptch1Q61115 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ptch1Q61115 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Ptch1Q61115 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ptch1Q61115 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ptch1Q61115 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ptch1Q61115 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC24.83■■□□□ 1.57
Ptch1Q61115 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Ptch1Q61115 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ptch1Q61115 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ptch1Q61115 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ptch1Q61115 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC24.83■■□□□ 1.57
Ptch1Q61115 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ptch1Q61115 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC24.83■■□□□ 1.57
Ptch1Q61115 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC24.83■■□□□ 1.57
Ptch1Q61115 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC24.83■■□□□ 1.57
Ptch1Q61115 Fst-202ENSMUST00000223640 2612 ntBASIC24.83■■□□□ 1.57
Ptch1Q61115 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Ptch1Q61115 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
Ptch1Q61115 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ptch1Q61115 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Ptch1Q61115 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC24.82■■□□□ 1.56
Ptch1Q61115 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
Ptch1Q61115 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.82■■□□□ 1.56
Ptch1Q61115 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ptch1Q61115 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ptch1Q61115 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Ptch1Q61115 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ptch1Q61115 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Ptch1Q61115 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ptch1Q61115 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ptch1Q61115 Gm29707-201ENSMUST00000196325 491 ntBASIC24.81■■□□□ 1.56
Ptch1Q61115 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ptch1Q61115 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
Ptch1Q61115 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ptch1Q61115 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
Ptch1Q61115 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ptch1Q61115 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
Ptch1Q61115 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ptch1Q61115 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
Ptch1Q61115 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC24.8■■□□□ 1.56
Ptch1Q61115 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Ptch1Q61115 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC24.8■■□□□ 1.56
Ptch1Q61115 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
Ptch1Q61115 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ptch1Q61115 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC24.8■■□□□ 1.56
Ptch1Q61115 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ptch1Q61115 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ptch1Q61115 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ptch1Q61115 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ptch1Q61115 AC131586.3-201ENSMUST00000228355 1367 ntBASIC24.8■■□□□ 1.56
Ptch1Q61115 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Ptch1Q61115 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ptch1Q61115 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ptch1Q61115 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ptch1Q61115 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ptch1Q61115 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ptch1Q61115 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC24.79■■□□□ 1.56
Ptch1Q61115 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC24.79■■□□□ 1.56
Ptch1Q61115 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Ptch1Q61115 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ptch1Q61115 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ptch1Q61115 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ptch1Q61115 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
Ptch1Q61115 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC24.79■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms