Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxf1Q61080 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxf1Q61080 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Foxf1Q61080 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Foxf1Q61080 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.4□□□□□ -0.1
Foxf1Q61080 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Foxf1Q61080 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxf1Q61080 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxf1Q61080 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxf1Q61080 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Foxf1Q61080 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxf1Q61080 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Foxf1Q61080 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxf1Q61080 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxf1Q61080 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Foxf1Q61080 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxf1Q61080 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.39□□□□□ -0.11
Foxf1Q61080 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Foxf1Q61080 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxf1Q61080 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Foxf1Q61080 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Foxf1Q61080 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Foxf1Q61080 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxf1Q61080 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxf1Q61080 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxf1Q61080 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Foxf1Q61080 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Foxf1Q61080 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Foxf1Q61080 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxf1Q61080 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.39□□□□□ -0.11
Foxf1Q61080 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxf1Q61080 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxf1Q61080 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.39□□□□□ -0.11
Foxf1Q61080 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxf1Q61080 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxf1Q61080 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxf1Q61080 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.38□□□□□ -0.11
Foxf1Q61080 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Foxf1Q61080 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxf1Q61080 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxf1Q61080 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxf1Q61080 Gm27011-201ENSMUST00000182352 972 ntBASIC14.38□□□□□ -0.11
Foxf1Q61080 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.38□□□□□ -0.11
Foxf1Q61080 Gm4974-201ENSMUST00000209974 875 ntBASIC14.38□□□□□ -0.11
Foxf1Q61080 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.38□□□□□ -0.11
Foxf1Q61080 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxf1Q61080 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Foxf1Q61080 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.38□□□□□ -0.11
Foxf1Q61080 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Foxf1Q61080 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxf1Q61080 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxf1Q61080 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxf1Q61080 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Foxf1Q61080 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxf1Q61080 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Foxf1Q61080 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.37□□□□□ -0.11
Foxf1Q61080 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxf1Q61080 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxf1Q61080 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxf1Q61080 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxf1Q61080 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Foxf1Q61080 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.37□□□□□ -0.11
Foxf1Q61080 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxf1Q61080 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.37□□□□□ -0.11
Foxf1Q61080 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxf1Q61080 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Foxf1Q61080 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Foxf1Q61080 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Foxf1Q61080 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxf1Q61080 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.37□□□□□ -0.11
Foxf1Q61080 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxf1Q61080 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxf1Q61080 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxf1Q61080 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxf1Q61080 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxf1Q61080 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Foxf1Q61080 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxf1Q61080 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxf1Q61080 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxf1Q61080 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxf1Q61080 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Foxf1Q61080 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Foxf1Q61080 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Foxf1Q61080 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Foxf1Q61080 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.36□□□□□ -0.11
Foxf1Q61080 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.36□□□□□ -0.11
Foxf1Q61080 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxf1Q61080 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Foxf1Q61080 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Foxf1Q61080 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxf1Q61080 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxf1Q61080 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxf1Q61080 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Foxf1Q61080 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.36□□□□□ -0.11
Foxf1Q61080 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Foxf1Q61080 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxf1Q61080 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxf1Q61080 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxf1Q61080 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Foxf1Q61080 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms