Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sim1Q61045 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sim1Q61045 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Sim1Q61045 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sim1Q61045 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sim1Q61045 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sim1Q61045 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sim1Q61045 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sim1Q61045 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sim1Q61045 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sim1Q61045 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sim1Q61045 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sim1Q61045 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.06■□□□□ 0.32
Sim1Q61045 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sim1Q61045 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Sim1Q61045 Gm10418-201ENSMUST00000100943 576 ntBASIC17.06■□□□□ 0.32
Sim1Q61045 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sim1Q61045 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sim1Q61045 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.06■□□□□ 0.32
Sim1Q61045 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.06■□□□□ 0.32
Sim1Q61045 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sim1Q61045 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sim1Q61045 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Sim1Q61045 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sim1Q61045 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sim1Q61045 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
Sim1Q61045 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sim1Q61045 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Sim1Q61045 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sim1Q61045 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sim1Q61045 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Sim1Q61045 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sim1Q61045 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sim1Q61045 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sim1Q61045 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sim1Q61045 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sim1Q61045 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sim1Q61045 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.05■□□□□ 0.32
Sim1Q61045 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.05■□□□□ 0.32
Sim1Q61045 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sim1Q61045 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sim1Q61045 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sim1Q61045 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sim1Q61045 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sim1Q61045 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.05■□□□□ 0.32
Sim1Q61045 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sim1Q61045 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Sim1Q61045 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sim1Q61045 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sim1Q61045 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sim1Q61045 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sim1Q61045 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sim1Q61045 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sim1Q61045 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sim1Q61045 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.04■□□□□ 0.32
Sim1Q61045 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sim1Q61045 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.04■□□□□ 0.32
Sim1Q61045 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sim1Q61045 Gm38027-201ENSMUST00000192315 235 ntBASIC17.04■□□□□ 0.32
Sim1Q61045 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sim1Q61045 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sim1Q61045 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sim1Q61045 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.04■□□□□ 0.32
Sim1Q61045 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Sim1Q61045 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Sim1Q61045 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.04■□□□□ 0.32
Sim1Q61045 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sim1Q61045 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Sim1Q61045 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sim1Q61045 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sim1Q61045 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sim1Q61045 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sim1Q61045 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Sim1Q61045 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sim1Q61045 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.03■□□□□ 0.32
Sim1Q61045 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.03■□□□□ 0.32
Sim1Q61045 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sim1Q61045 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sim1Q61045 Gm27704-201ENSMUST00000185094 107 ntBASIC17.03■□□□□ 0.32
Sim1Q61045 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.03■□□□□ 0.32
Sim1Q61045 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Sim1Q61045 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sim1Q61045 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sim1Q61045 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.03■□□□□ 0.32
Sim1Q61045 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.03■□□□□ 0.32
Sim1Q61045 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sim1Q61045 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.03■□□□□ 0.32
Sim1Q61045 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Sim1Q61045 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sim1Q61045 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.02■□□□□ 0.32
Sim1Q61045 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Sim1Q61045 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sim1Q61045 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sim1Q61045 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.02■□□□□ 0.32
Sim1Q61045 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.02■□□□□ 0.32
Sim1Q61045 Gm44771-201ENSMUST00000206975 626 ntBASIC17.02■□□□□ 0.32
Sim1Q61045 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sim1Q61045 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Sim1Q61045 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sim1Q61045 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms