Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc6a4Q60857 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Slc6a4Q60857 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a4Q60857 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a4Q60857 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a4Q60857 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a4Q60857 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a4Q60857 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Slc6a4Q60857 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a4Q60857 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a4Q60857 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Slc6a4Q60857 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a4Q60857 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Slc6a4Q60857 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.61■□□□□ 0.41
Slc6a4Q60857 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a4Q60857 Mir1668-201ENSMUST00000184114 107 ntBASIC17.61■□□□□ 0.41
Slc6a4Q60857 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Slc6a4Q60857 Gm21559-201ENSMUST00000220638 855 ntBASIC17.61■□□□□ 0.41
Slc6a4Q60857 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a4Q60857 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a4Q60857 Gm8587-201ENSMUST00000076538 843 ntBASIC17.61■□□□□ 0.41
Slc6a4Q60857 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Slc6a4Q60857 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a4Q60857 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.61■□□□□ 0.41
Slc6a4Q60857 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a4Q60857 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a4Q60857 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.61■□□□□ 0.41
Slc6a4Q60857 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a4Q60857 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a4Q60857 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.61■□□□□ 0.41
Slc6a4Q60857 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a4Q60857 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a4Q60857 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.61■□□□□ 0.41
Slc6a4Q60857 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
Slc6a4Q60857 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a4Q60857 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a4Q60857 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a4Q60857 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a4Q60857 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a4Q60857 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a4Q60857 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a4Q60857 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a4Q60857 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Slc6a4Q60857 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.6■□□□□ 0.41
Slc6a4Q60857 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.6■□□□□ 0.41
Slc6a4Q60857 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a4Q60857 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Slc6a4Q60857 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a4Q60857 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a4Q60857 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a4Q60857 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Slc6a4Q60857 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a4Q60857 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a4Q60857 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a4Q60857 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a4Q60857 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a4Q60857 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a4Q60857 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a4Q60857 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a4Q60857 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.59■□□□□ 0.41
Slc6a4Q60857 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a4Q60857 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.59■□□□□ 0.41
Slc6a4Q60857 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a4Q60857 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Slc6a4Q60857 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a4Q60857 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a4Q60857 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a4Q60857 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a4Q60857 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.59■□□□□ 0.41
Slc6a4Q60857 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a4Q60857 Gm18958-201ENSMUST00000174258 762 ntBASIC17.59■□□□□ 0.41
Slc6a4Q60857 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.59■□□□□ 0.41
Slc6a4Q60857 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.59■□□□□ 0.41
Slc6a4Q60857 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a4Q60857 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a4Q60857 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a4Q60857 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a4Q60857 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a4Q60857 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a4Q60857 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a4Q60857 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.59■□□□□ 0.41
Slc6a4Q60857 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a4Q60857 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Slc6a4Q60857 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc6a4Q60857 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Slc6a4Q60857 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Slc6a4Q60857 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Slc6a4Q60857 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc6a4Q60857 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc6a4Q60857 AA414768-201ENSMUST00000121924 1257 ntBASIC17.58■□□□□ 0.4
Slc6a4Q60857 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Slc6a4Q60857 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.58■□□□□ 0.4
Slc6a4Q60857 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.58■□□□□ 0.4
Slc6a4Q60857 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.58■□□□□ 0.4
Slc6a4Q60857 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Slc6a4Q60857 Rarb-207ENSMUST00000225921 2756 ntBASIC17.58■□□□□ 0.4
Slc6a4Q60857 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc6a4Q60857 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc6a4Q60857 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc6a4Q60857 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms