Protein–RNA interactions for Protein: Q5XF89

Atp13a3, Probable cation-transporting ATPase 13A3, mousemouse

Predictions only

Length 1,219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a3Q5XF89 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.45■□□□□ 0.7
Atp13a3Q5XF89 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Atp13a3Q5XF89 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atp13a3Q5XF89 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.45■□□□□ 0.7
Atp13a3Q5XF89 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atp13a3Q5XF89 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atp13a3Q5XF89 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Atp13a3Q5XF89 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Atp13a3Q5XF89 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atp13a3Q5XF89 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Atp13a3Q5XF89 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.45■□□□□ 0.7
Atp13a3Q5XF89 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Atp13a3Q5XF89 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atp13a3Q5XF89 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atp13a3Q5XF89 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.44■□□□□ 0.7
Atp13a3Q5XF89 Gm9103-201ENSMUST00000119371 405 ntBASIC19.44■□□□□ 0.7
Atp13a3Q5XF89 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Atp13a3Q5XF89 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.44■□□□□ 0.7
Atp13a3Q5XF89 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.44■□□□□ 0.7
Atp13a3Q5XF89 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atp13a3Q5XF89 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Atp13a3Q5XF89 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Atp13a3Q5XF89 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Atp13a3Q5XF89 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atp13a3Q5XF89 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Atp13a3Q5XF89 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Atp13a3Q5XF89 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Atp13a3Q5XF89 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atp13a3Q5XF89 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atp13a3Q5XF89 Gm11950-201ENSMUST00000121615 838 ntBASIC19.43■□□□□ 0.7
Atp13a3Q5XF89 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atp13a3Q5XF89 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atp13a3Q5XF89 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atp13a3Q5XF89 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Atp13a3Q5XF89 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.43■□□□□ 0.7
Atp13a3Q5XF89 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atp13a3Q5XF89 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atp13a3Q5XF89 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atp13a3Q5XF89 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atp13a3Q5XF89 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atp13a3Q5XF89 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Atp13a3Q5XF89 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atp13a3Q5XF89 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.42■□□□□ 0.7
Atp13a3Q5XF89 Mir770-201ENSMUST00000103252 94 ntBASIC19.42■□□□□ 0.7
Atp13a3Q5XF89 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.42■□□□□ 0.7
Atp13a3Q5XF89 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Atp13a3Q5XF89 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Atp13a3Q5XF89 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atp13a3Q5XF89 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atp13a3Q5XF89 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atp13a3Q5XF89 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Atp13a3Q5XF89 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atp13a3Q5XF89 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Atp13a3Q5XF89 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atp13a3Q5XF89 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atp13a3Q5XF89 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Atp13a3Q5XF89 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Atp13a3Q5XF89 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Atp13a3Q5XF89 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atp13a3Q5XF89 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atp13a3Q5XF89 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atp13a3Q5XF89 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atp13a3Q5XF89 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atp13a3Q5XF89 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atp13a3Q5XF89 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.41■□□□□ 0.7
Atp13a3Q5XF89 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atp13a3Q5XF89 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Atp13a3Q5XF89 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atp13a3Q5XF89 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atp13a3Q5XF89 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Atp13a3Q5XF89 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atp13a3Q5XF89 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atp13a3Q5XF89 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atp13a3Q5XF89 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Atp13a3Q5XF89 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.4■□□□□ 0.7
Atp13a3Q5XF89 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.4■□□□□ 0.7
Atp13a3Q5XF89 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.4■□□□□ 0.7
Atp13a3Q5XF89 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Atp13a3Q5XF89 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atp13a3Q5XF89 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atp13a3Q5XF89 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atp13a3Q5XF89 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atp13a3Q5XF89 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atp13a3Q5XF89 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
Atp13a3Q5XF89 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
Atp13a3Q5XF89 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atp13a3Q5XF89 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atp13a3Q5XF89 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Atp13a3Q5XF89 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Atp13a3Q5XF89 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Atp13a3Q5XF89 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
Atp13a3Q5XF89 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.39■□□□□ 0.69
Atp13a3Q5XF89 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atp13a3Q5XF89 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.39■□□□□ 0.69
Atp13a3Q5XF89 Gm6623-201ENSMUST00000173570 544 ntBASIC19.39■□□□□ 0.69
Atp13a3Q5XF89 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.39■□□□□ 0.69
Atp13a3Q5XF89 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atp13a3Q5XF89 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Atp13a3Q5XF89 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Atp13a3Q5XF89 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms