Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Ubr3Q5U430 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ubr3Q5U430 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.93■□□□□ 0.94
Ubr3Q5U430 Fst-202ENSMUST00000223640 2612 ntBASIC20.93■□□□□ 0.94
Ubr3Q5U430 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ubr3Q5U430 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ubr3Q5U430 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ubr3Q5U430 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ubr3Q5U430 Gm29707-201ENSMUST00000196325 491 ntBASIC20.92■□□□□ 0.94
Ubr3Q5U430 Gm43332-201ENSMUST00000202511 1044 ntBASIC20.92■□□□□ 0.94
Ubr3Q5U430 AC160338.1-201ENSMUST00000214232 705 ntBASIC20.92■□□□□ 0.94
Ubr3Q5U430 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ubr3Q5U430 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC20.92■□□□□ 0.94
Ubr3Q5U430 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC20.92■□□□□ 0.94
Ubr3Q5U430 AC159093.1-201ENSMUST00000227779 380 ntBASIC20.92■□□□□ 0.94
Ubr3Q5U430 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ubr3Q5U430 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC20.92■□□□□ 0.94
Ubr3Q5U430 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ubr3Q5U430 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ubr3Q5U430 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC20.91■□□□□ 0.94
Ubr3Q5U430 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ubr3Q5U430 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ubr3Q5U430 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ubr3Q5U430 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ubr3Q5U430 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ubr3Q5U430 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ubr3Q5U430 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ubr3Q5U430 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC20.9■□□□□ 0.94
Ubr3Q5U430 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC20.9■□□□□ 0.94
Ubr3Q5U430 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
Ubr3Q5U430 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ubr3Q5U430 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Ubr3Q5U430 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ubr3Q5U430 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC20.9■□□□□ 0.94
Ubr3Q5U430 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ubr3Q5U430 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ubr3Q5U430 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ubr3Q5U430 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ubr3Q5U430 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ubr3Q5U430 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ubr3Q5U430 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ubr3Q5U430 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.89■□□□□ 0.93
Ubr3Q5U430 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ubr3Q5U430 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ubr3Q5U430 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Ubr3Q5U430 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Ubr3Q5U430 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ubr3Q5U430 Gm5264-201ENSMUST00000190584 848 ntBASIC20.89■□□□□ 0.93
Ubr3Q5U430 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.93
Ubr3Q5U430 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ubr3Q5U430 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ubr3Q5U430 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ubr3Q5U430 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ubr3Q5U430 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ubr3Q5U430 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ubr3Q5U430 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC20.88■□□□□ 0.93
Ubr3Q5U430 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ubr3Q5U430 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Ubr3Q5U430 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC20.88■□□□□ 0.93
Ubr3Q5U430 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ubr3Q5U430 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ubr3Q5U430 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ubr3Q5U430 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ubr3Q5U430 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ubr3Q5U430 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ubr3Q5U430 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Ubr3Q5U430 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ubr3Q5U430 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ubr3Q5U430 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
Ubr3Q5U430 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ubr3Q5U430 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ubr3Q5U430 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ubr3Q5U430 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ubr3Q5U430 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC20.87■□□□□ 0.93
Ubr3Q5U430 Gm42670-201ENSMUST00000201816 1292 ntBASIC20.87■□□□□ 0.93
Ubr3Q5U430 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.87■□□□□ 0.93
Ubr3Q5U430 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ubr3Q5U430 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ubr3Q5U430 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ubr3Q5U430 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ubr3Q5U430 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ubr3Q5U430 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Ubr3Q5U430 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ubr3Q5U430 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ubr3Q5U430 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ubr3Q5U430 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC20.86■□□□□ 0.93
Ubr3Q5U430 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ubr3Q5U430 Gm7230-201ENSMUST00000173026 815 ntBASIC20.86■□□□□ 0.93
Ubr3Q5U430 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ubr3Q5U430 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ubr3Q5U430 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ubr3Q5U430 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Ubr3Q5U430 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.86■□□□□ 0.93
Ubr3Q5U430 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ubr3Q5U430 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ubr3Q5U430 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ubr3Q5U430 Gm13312-201ENSMUST00000119631 718 ntBASIC20.86■□□□□ 0.93
Ubr3Q5U430 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ubr3Q5U430 CT009713.7-201ENSMUST00000224689 571 ntBASIC20.86■□□□□ 0.93
Ubr3Q5U430 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms