Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim38Q5SZ99 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim38Q5SZ99 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim38Q5SZ99 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim38Q5SZ99 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim38Q5SZ99 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trim38Q5SZ99 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim38Q5SZ99 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim38Q5SZ99 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim38Q5SZ99 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trim38Q5SZ99 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim38Q5SZ99 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim38Q5SZ99 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim38Q5SZ99 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Trim38Q5SZ99 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim38Q5SZ99 Gm10698-201ENSMUST00000182663 604 ntBASIC17.85■□□□□ 0.45
Trim38Q5SZ99 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim38Q5SZ99 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim38Q5SZ99 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.85■□□□□ 0.45
Trim38Q5SZ99 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim38Q5SZ99 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim38Q5SZ99 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Trim38Q5SZ99 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim38Q5SZ99 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.85■□□□□ 0.45
Trim38Q5SZ99 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim38Q5SZ99 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim38Q5SZ99 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim38Q5SZ99 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim38Q5SZ99 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim38Q5SZ99 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim38Q5SZ99 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim38Q5SZ99 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trim38Q5SZ99 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim38Q5SZ99 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim38Q5SZ99 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim38Q5SZ99 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim38Q5SZ99 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim38Q5SZ99 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim38Q5SZ99 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim38Q5SZ99 Gm24841-201ENSMUST00000158676 357 ntBASIC17.84■□□□□ 0.45
Trim38Q5SZ99 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.84■□□□□ 0.45
Trim38Q5SZ99 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.84■□□□□ 0.45
Trim38Q5SZ99 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim38Q5SZ99 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim38Q5SZ99 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim38Q5SZ99 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Trim38Q5SZ99 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim38Q5SZ99 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim38Q5SZ99 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.84■□□□□ 0.45
Trim38Q5SZ99 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Trim38Q5SZ99 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim38Q5SZ99 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim38Q5SZ99 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim38Q5SZ99 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim38Q5SZ99 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim38Q5SZ99 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim38Q5SZ99 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim38Q5SZ99 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trim38Q5SZ99 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim38Q5SZ99 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim38Q5SZ99 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim38Q5SZ99 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim38Q5SZ99 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim38Q5SZ99 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim38Q5SZ99 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim38Q5SZ99 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim38Q5SZ99 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Trim38Q5SZ99 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim38Q5SZ99 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim38Q5SZ99 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim38Q5SZ99 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Trim38Q5SZ99 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim38Q5SZ99 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim38Q5SZ99 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim38Q5SZ99 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trim38Q5SZ99 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim38Q5SZ99 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.82■□□□□ 0.44
Trim38Q5SZ99 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim38Q5SZ99 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim38Q5SZ99 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trim38Q5SZ99 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim38Q5SZ99 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim38Q5SZ99 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim38Q5SZ99 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim38Q5SZ99 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim38Q5SZ99 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trim38Q5SZ99 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim38Q5SZ99 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim38Q5SZ99 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim38Q5SZ99 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.81■□□□□ 0.44
Trim38Q5SZ99 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Trim38Q5SZ99 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim38Q5SZ99 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim38Q5SZ99 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim38Q5SZ99 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim38Q5SZ99 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.81■□□□□ 0.44
Trim38Q5SZ99 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim38Q5SZ99 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim38Q5SZ99 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim38Q5SZ99 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms