Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Shroom1Q5SX79 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Shroom1Q5SX79 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shroom1Q5SX79 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shroom1Q5SX79 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Shroom1Q5SX79 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Shroom1Q5SX79 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shroom1Q5SX79 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Shroom1Q5SX79 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Shroom1Q5SX79 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Shroom1Q5SX79 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shroom1Q5SX79 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shroom1Q5SX79 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Shroom1Q5SX79 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Shroom1Q5SX79 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Shroom1Q5SX79 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Shroom1Q5SX79 Gm9731-201ENSMUST00000209480 747 ntBASIC18.29■□□□□ 0.52
Shroom1Q5SX79 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Shroom1Q5SX79 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shroom1Q5SX79 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shroom1Q5SX79 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Shroom1Q5SX79 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Shroom1Q5SX79 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shroom1Q5SX79 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Shroom1Q5SX79 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shroom1Q5SX79 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shroom1Q5SX79 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shroom1Q5SX79 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shroom1Q5SX79 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Shroom1Q5SX79 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shroom1Q5SX79 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Shroom1Q5SX79 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shroom1Q5SX79 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Shroom1Q5SX79 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shroom1Q5SX79 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shroom1Q5SX79 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shroom1Q5SX79 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shroom1Q5SX79 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shroom1Q5SX79 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Shroom1Q5SX79 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.28■□□□□ 0.52
Shroom1Q5SX79 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.28■□□□□ 0.52
Shroom1Q5SX79 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Shroom1Q5SX79 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Shroom1Q5SX79 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shroom1Q5SX79 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shroom1Q5SX79 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shroom1Q5SX79 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shroom1Q5SX79 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.27■□□□□ 0.52
Shroom1Q5SX79 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shroom1Q5SX79 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Shroom1Q5SX79 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.27■□□□□ 0.52
Shroom1Q5SX79 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shroom1Q5SX79 Gm25016-201ENSMUST00000158399 131 ntBASIC18.27■□□□□ 0.52
Shroom1Q5SX79 Gm7370-201ENSMUST00000219471 767 ntBASIC18.27■□□□□ 0.52
Shroom1Q5SX79 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shroom1Q5SX79 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Shroom1Q5SX79 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shroom1Q5SX79 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shroom1Q5SX79 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shroom1Q5SX79 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shroom1Q5SX79 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shroom1Q5SX79 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Shroom1Q5SX79 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.27■□□□□ 0.51
Shroom1Q5SX79 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Shroom1Q5SX79 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shroom1Q5SX79 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shroom1Q5SX79 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shroom1Q5SX79 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shroom1Q5SX79 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shroom1Q5SX79 Mir1668-201ENSMUST00000184114 107 ntBASIC18.26■□□□□ 0.51
Shroom1Q5SX79 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shroom1Q5SX79 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shroom1Q5SX79 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shroom1Q5SX79 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Shroom1Q5SX79 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shroom1Q5SX79 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shroom1Q5SX79 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shroom1Q5SX79 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shroom1Q5SX79 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Shroom1Q5SX79 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.26■□□□□ 0.51
Shroom1Q5SX79 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shroom1Q5SX79 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.25■□□□□ 0.51
Shroom1Q5SX79 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shroom1Q5SX79 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shroom1Q5SX79 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shroom1Q5SX79 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Shroom1Q5SX79 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.25■□□□□ 0.51
Shroom1Q5SX79 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.25■□□□□ 0.51
Shroom1Q5SX79 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shroom1Q5SX79 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shroom1Q5SX79 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shroom1Q5SX79 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shroom1Q5SX79 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shroom1Q5SX79 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shroom1Q5SX79 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shroom1Q5SX79 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Shroom1Q5SX79 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shroom1Q5SX79 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shroom1Q5SX79 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shroom1Q5SX79 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms