Protein–RNA interactions for Protein: Q5RJF7

Cacna2d4, Voltage-dependent calcium channel subunit alpha-2/delta-4, mousemouse

Predictions only

Length 1,116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna2d4Q5RJF7 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna2d4Q5RJF7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna2d4Q5RJF7 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna2d4Q5RJF7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna2d4Q5RJF7 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cacna2d4Q5RJF7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna2d4Q5RJF7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna2d4Q5RJF7 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna2d4Q5RJF7 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.17■□□□□ 0.66
Cacna2d4Q5RJF7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna2d4Q5RJF7 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna2d4Q5RJF7 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna2d4Q5RJF7 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna2d4Q5RJF7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Cacna2d4Q5RJF7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.17■□□□□ 0.66
Cacna2d4Q5RJF7 Timm23-208ENSMUST00000226683 750 ntBASIC19.17■□□□□ 0.66
Cacna2d4Q5RJF7 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna2d4Q5RJF7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cacna2d4Q5RJF7 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna2d4Q5RJF7 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna2d4Q5RJF7 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna2d4Q5RJF7 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna2d4Q5RJF7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna2d4Q5RJF7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Cacna2d4Q5RJF7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna2d4Q5RJF7 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna2d4Q5RJF7 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Cacna2d4Q5RJF7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna2d4Q5RJF7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna2d4Q5RJF7 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna2d4Q5RJF7 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.16■□□□□ 0.66
Cacna2d4Q5RJF7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.16■□□□□ 0.66
Cacna2d4Q5RJF7 Gm24841-201ENSMUST00000158676 357 ntBASIC19.16■□□□□ 0.66
Cacna2d4Q5RJF7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.16■□□□□ 0.66
Cacna2d4Q5RJF7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna2d4Q5RJF7 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna2d4Q5RJF7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.16■□□□□ 0.66
Cacna2d4Q5RJF7 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna2d4Q5RJF7 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna2d4Q5RJF7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna2d4Q5RJF7 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna2d4Q5RJF7 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna2d4Q5RJF7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna2d4Q5RJF7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna2d4Q5RJF7 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Cacna2d4Q5RJF7 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna2d4Q5RJF7 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna2d4Q5RJF7 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Cacna2d4Q5RJF7 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna2d4Q5RJF7 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna2d4Q5RJF7 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna2d4Q5RJF7 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Cacna2d4Q5RJF7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna2d4Q5RJF7 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna2d4Q5RJF7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna2d4Q5RJF7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.15■□□□□ 0.66
Cacna2d4Q5RJF7 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cacna2d4Q5RJF7 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cacna2d4Q5RJF7 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Cacna2d4Q5RJF7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Cacna2d4Q5RJF7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cacna2d4Q5RJF7 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cacna2d4Q5RJF7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cacna2d4Q5RJF7 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cacna2d4Q5RJF7 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.14■□□□□ 0.65
Cacna2d4Q5RJF7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.14■□□□□ 0.65
Cacna2d4Q5RJF7 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cacna2d4Q5RJF7 Mir5122-201ENSMUST00000175004 89 ntBASIC19.14■□□□□ 0.65
Cacna2d4Q5RJF7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cacna2d4Q5RJF7 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cacna2d4Q5RJF7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.14■□□□□ 0.65
Cacna2d4Q5RJF7 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cacna2d4Q5RJF7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cacna2d4Q5RJF7 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cacna2d4Q5RJF7 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cacna2d4Q5RJF7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cacna2d4Q5RJF7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Cacna2d4Q5RJF7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna2d4Q5RJF7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.13■□□□□ 0.65
Cacna2d4Q5RJF7 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.13■□□□□ 0.65
Cacna2d4Q5RJF7 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna2d4Q5RJF7 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.13■□□□□ 0.65
Cacna2d4Q5RJF7 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna2d4Q5RJF7 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna2d4Q5RJF7 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.13■□□□□ 0.65
Cacna2d4Q5RJF7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cacna2d4Q5RJF7 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Cacna2d4Q5RJF7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna2d4Q5RJF7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna2d4Q5RJF7 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Cacna2d4Q5RJF7 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.12■□□□□ 0.65
Cacna2d4Q5RJF7 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna2d4Q5RJF7 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna2d4Q5RJF7 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.12■□□□□ 0.65
Cacna2d4Q5RJF7 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.12■□□□□ 0.65
Cacna2d4Q5RJF7 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna2d4Q5RJF7 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna2d4Q5RJF7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.12■□□□□ 0.65
Cacna2d4Q5RJF7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna2d4Q5RJF7 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms