Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav3-1Q5R1I8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-1Q5R1I8 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-1Q5R1I8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-1Q5R1I8 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-1Q5R1I8 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-1Q5R1I8 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-1Q5R1I8 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-1Q5R1I8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-1Q5R1I8 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-1Q5R1I8 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Trav3-1Q5R1I8 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3-1Q5R1I8 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-1Q5R1I8 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-1Q5R1I8 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-1Q5R1I8 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-1Q5R1I8 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav3-1Q5R1I8 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-1Q5R1I8 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav3-1Q5R1I8 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-1Q5R1I8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-1Q5R1I8 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-1Q5R1I8 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Trav3-1Q5R1I8 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav3-1Q5R1I8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav3-1Q5R1I8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC11.73□□□□□ -0.53
Trav3-1Q5R1I8 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Trav3-1Q5R1I8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav3-1Q5R1I8 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-1Q5R1I8 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-1Q5R1I8 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-1Q5R1I8 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav3-1Q5R1I8 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 AC154412.1-201ENSMUST00000226540 2786 ntBASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-1Q5R1I8 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-1Q5R1I8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-1Q5R1I8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav3-1Q5R1I8 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-1Q5R1I8 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-1Q5R1I8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-1Q5R1I8 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Trav3-1Q5R1I8 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-1Q5R1I8 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-1Q5R1I8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-1Q5R1I8 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-1Q5R1I8 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trav3-1Q5R1I8 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-1Q5R1I8 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-1Q5R1I8 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-1Q5R1I8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-1Q5R1I8 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav3-1Q5R1I8 Phf7-203ENSMUST00000226565 1971 ntBASIC11.71□□□□□ -0.53
Trav3-1Q5R1I8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav3-1Q5R1I8 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-1Q5R1I8 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-1Q5R1I8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav3-1Q5R1I8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav3-1Q5R1I8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC11.71□□□□□ -0.54
Trav3-1Q5R1I8 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav3-1Q5R1I8 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav3-1Q5R1I8 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms