Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav5d-4Q5R1F6 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav5d-4Q5R1F6 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav5d-4Q5R1F6 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav5d-4Q5R1F6 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Trav5d-4Q5R1F6 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav5d-4Q5R1F6 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav5d-4Q5R1F6 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav5d-4Q5R1F6 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav5d-4Q5R1F6 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav5d-4Q5R1F6 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav5d-4Q5R1F6 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav5d-4Q5R1F6 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav5d-4Q5R1F6 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav5d-4Q5R1F6 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav5d-4Q5R1F6 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav5d-4Q5R1F6 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav5d-4Q5R1F6 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav5d-4Q5R1F6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav5d-4Q5R1F6 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav5d-4Q5R1F6 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trav5d-4Q5R1F6 Gm12382-201ENSMUST00000122005 922 ntBASIC14.81□□□□□ -0.04
Trav5d-4Q5R1F6 Gm37292-201ENSMUST00000192062 758 ntBASIC14.81□□□□□ -0.04
Trav5d-4Q5R1F6 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav5d-4Q5R1F6 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav5d-4Q5R1F6 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav5d-4Q5R1F6 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav5d-4Q5R1F6 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav5d-4Q5R1F6 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav5d-4Q5R1F6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav5d-4Q5R1F6 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav5d-4Q5R1F6 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav5d-4Q5R1F6 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav5d-4Q5R1F6 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav5d-4Q5R1F6 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trav5d-4Q5R1F6 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav5d-4Q5R1F6 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav5d-4Q5R1F6 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav5d-4Q5R1F6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.8□□□□□ -0.04
Trav5d-4Q5R1F6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav5d-4Q5R1F6 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.8□□□□□ -0.04
Trav5d-4Q5R1F6 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.8□□□□□ -0.04
Trav5d-4Q5R1F6 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav5d-4Q5R1F6 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav5d-4Q5R1F6 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav5d-4Q5R1F6 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav5d-4Q5R1F6 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav5d-4Q5R1F6 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav5d-4Q5R1F6 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav5d-4Q5R1F6 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Trav5d-4Q5R1F6 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav5d-4Q5R1F6 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav5d-4Q5R1F6 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav5d-4Q5R1F6 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav5d-4Q5R1F6 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav5d-4Q5R1F6 Gm5643-201ENSMUST00000117081 966 ntBASIC14.79□□□□□ -0.04
Trav5d-4Q5R1F6 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav5d-4Q5R1F6 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav5d-4Q5R1F6 Gm10653-202ENSMUST00000139570 835 ntBASIC14.79□□□□□ -0.04
Trav5d-4Q5R1F6 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav5d-4Q5R1F6 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav5d-4Q5R1F6 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav5d-4Q5R1F6 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav5d-4Q5R1F6 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav5d-4Q5R1F6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav5d-4Q5R1F6 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav5d-4Q5R1F6 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav5d-4Q5R1F6 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Trav5d-4Q5R1F6 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav5d-4Q5R1F6 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav5d-4Q5R1F6 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav5d-4Q5R1F6 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trav5d-4Q5R1F6 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav5d-4Q5R1F6 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav5d-4Q5R1F6 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav5d-4Q5R1F6 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5d-4Q5R1F6 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5d-4Q5R1F6 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5d-4Q5R1F6 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav5d-4Q5R1F6 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5d-4Q5R1F6 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5d-4Q5R1F6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Trav5d-4Q5R1F6 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.78□□□□□ -0.04
Trav5d-4Q5R1F6 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5d-4Q5R1F6 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5d-4Q5R1F6 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5d-4Q5R1F6 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.78□□□□□ -0.04
Trav5d-4Q5R1F6 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.78□□□□□ -0.04
Trav5d-4Q5R1F6 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5d-4Q5R1F6 Gm43183-201ENSMUST00000200632 547 ntBASIC14.78□□□□□ -0.04
Trav5d-4Q5R1F6 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5d-4Q5R1F6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5d-4Q5R1F6 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trav5d-4Q5R1F6 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5d-4Q5R1F6 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5d-4Q5R1F6 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trav5d-4Q5R1F6 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5d-4Q5R1F6 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.78□□□□□ -0.04
Trav5d-4Q5R1F6 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Trav5d-4Q5R1F6 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms