Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-3Q5R1E6 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-3Q5R1E6 Gm11249-201ENSMUST00000117071 859 ntBASIC13.83□□□□□ -0.2
Trav6-3Q5R1E6 Gm13216-201ENSMUST00000117145 591 ntBASIC13.83□□□□□ -0.2
Trav6-3Q5R1E6 Gm12896-201ENSMUST00000118430 226 ntBASIC13.83□□□□□ -0.2
Trav6-3Q5R1E6 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.83□□□□□ -0.2
Trav6-3Q5R1E6 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav6-3Q5R1E6 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trav6-3Q5R1E6 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-3Q5R1E6 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.83□□□□□ -0.2
Trav6-3Q5R1E6 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-3Q5R1E6 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-3Q5R1E6 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-3Q5R1E6 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-3Q5R1E6 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-3Q5R1E6 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav6-3Q5R1E6 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-3Q5R1E6 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-3Q5R1E6 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav6-3Q5R1E6 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav6-3Q5R1E6 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-3Q5R1E6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.83□□□□□ -0.2
Trav6-3Q5R1E6 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-3Q5R1E6 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-3Q5R1E6 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-3Q5R1E6 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-3Q5R1E6 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-3Q5R1E6 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-3Q5R1E6 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trav6-3Q5R1E6 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.82□□□□□ -0.2
Trav6-3Q5R1E6 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trav6-3Q5R1E6 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.82□□□□□ -0.2
Trav6-3Q5R1E6 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-3Q5R1E6 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-3Q5R1E6 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-3Q5R1E6 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-3Q5R1E6 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.82□□□□□ -0.2
Trav6-3Q5R1E6 Gm13158-201ENSMUST00000122007 736 ntBASIC13.82□□□□□ -0.2
Trav6-3Q5R1E6 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.82□□□□□ -0.2
Trav6-3Q5R1E6 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav6-3Q5R1E6 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-3Q5R1E6 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-3Q5R1E6 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Trav6-3Q5R1E6 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-3Q5R1E6 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-3Q5R1E6 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-3Q5R1E6 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-3Q5R1E6 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-3Q5R1E6 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-3Q5R1E6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-3Q5R1E6 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-3Q5R1E6 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-3Q5R1E6 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.81□□□□□ -0.2
Trav6-3Q5R1E6 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Trav6-3Q5R1E6 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-3Q5R1E6 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-3Q5R1E6 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.81□□□□□ -0.2
Trav6-3Q5R1E6 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-3Q5R1E6 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-3Q5R1E6 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-3Q5R1E6 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Trav6-3Q5R1E6 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-3Q5R1E6 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-3Q5R1E6 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-3Q5R1E6 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-3Q5R1E6 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-3Q5R1E6 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trav6-3Q5R1E6 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-3Q5R1E6 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-3Q5R1E6 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.8□□□□□ -0.2
Trav6-3Q5R1E6 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-3Q5R1E6 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-3Q5R1E6 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-3Q5R1E6 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-3Q5R1E6 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.8□□□□□ -0.2
Trav6-3Q5R1E6 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.8□□□□□ -0.2
Trav6-3Q5R1E6 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-3Q5R1E6 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-3Q5R1E6 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trav6-3Q5R1E6 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trav6-3Q5R1E6 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-3Q5R1E6 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-3Q5R1E6 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-3Q5R1E6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
Trav6-3Q5R1E6 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-3Q5R1E6 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-3Q5R1E6 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-3Q5R1E6 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-3Q5R1E6 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-3Q5R1E6 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Trav6-3Q5R1E6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-3Q5R1E6 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-3Q5R1E6 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-3Q5R1E6 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-3Q5R1E6 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-3Q5R1E6 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.79□□□□□ -0.2
Trav6-3Q5R1E6 Gm18025-201ENSMUST00000221733 862 ntBASIC13.79□□□□□ -0.2
Trav6-3Q5R1E6 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-3Q5R1E6 Gm10602-201ENSMUST00000098239 609 ntBASIC13.79□□□□□ -0.2
Trav6-3Q5R1E6 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms