Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav8d-2Q5R1B6 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav8d-2Q5R1B6 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav8d-2Q5R1B6 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav8d-2Q5R1B6 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav8d-2Q5R1B6 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav8d-2Q5R1B6 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.76■□□□□ 0.27
Trav8d-2Q5R1B6 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.76■□□□□ 0.27
Trav8d-2Q5R1B6 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav8d-2Q5R1B6 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav8d-2Q5R1B6 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.76■□□□□ 0.27
Trav8d-2Q5R1B6 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.76■□□□□ 0.27
Trav8d-2Q5R1B6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.76■□□□□ 0.27
Trav8d-2Q5R1B6 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav8d-2Q5R1B6 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav8d-2Q5R1B6 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav8d-2Q5R1B6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav8d-2Q5R1B6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trav8d-2Q5R1B6 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav8d-2Q5R1B6 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.75■□□□□ 0.27
Trav8d-2Q5R1B6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav8d-2Q5R1B6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav8d-2Q5R1B6 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav8d-2Q5R1B6 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.75■□□□□ 0.27
Trav8d-2Q5R1B6 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav8d-2Q5R1B6 Gm12644-201ENSMUST00000119935 606 ntBASIC16.75■□□□□ 0.27
Trav8d-2Q5R1B6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav8d-2Q5R1B6 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav8d-2Q5R1B6 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.75■□□□□ 0.27
Trav8d-2Q5R1B6 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav8d-2Q5R1B6 Idnk-204ENSMUST00000226010 1898 ntBASIC16.75■□□□□ 0.27
Trav8d-2Q5R1B6 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav8d-2Q5R1B6 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav8d-2Q5R1B6 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.75■□□□□ 0.27
Trav8d-2Q5R1B6 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav8d-2Q5R1B6 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav8d-2Q5R1B6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav8d-2Q5R1B6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav8d-2Q5R1B6 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.74■□□□□ 0.27
Trav8d-2Q5R1B6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav8d-2Q5R1B6 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav8d-2Q5R1B6 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Trav8d-2Q5R1B6 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav8d-2Q5R1B6 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav8d-2Q5R1B6 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav8d-2Q5R1B6 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav8d-2Q5R1B6 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.74■□□□□ 0.27
Trav8d-2Q5R1B6 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav8d-2Q5R1B6 Gm2651-201ENSMUST00000203560 838 ntBASIC16.74■□□□□ 0.27
Trav8d-2Q5R1B6 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.74■□□□□ 0.27
Trav8d-2Q5R1B6 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav8d-2Q5R1B6 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav8d-2Q5R1B6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav8d-2Q5R1B6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Trav8d-2Q5R1B6 Golph3-205ENSMUST00000228671 2842 ntBASIC16.74■□□□□ 0.27
Trav8d-2Q5R1B6 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Trav8d-2Q5R1B6 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav8d-2Q5R1B6 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav8d-2Q5R1B6 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav8d-2Q5R1B6 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.73■□□□□ 0.27
Trav8d-2Q5R1B6 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trav8d-2Q5R1B6 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav8d-2Q5R1B6 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trav8d-2Q5R1B6 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.73■□□□□ 0.27
Trav8d-2Q5R1B6 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.73■□□□□ 0.27
Trav8d-2Q5R1B6 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav8d-2Q5R1B6 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Trav8d-2Q5R1B6 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav8d-2Q5R1B6 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trav8d-2Q5R1B6 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav8d-2Q5R1B6 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav8d-2Q5R1B6 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav8d-2Q5R1B6 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav8d-2Q5R1B6 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.73■□□□□ 0.27
Trav8d-2Q5R1B6 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.73■□□□□ 0.27
Trav8d-2Q5R1B6 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav8d-2Q5R1B6 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav8d-2Q5R1B6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav8d-2Q5R1B6 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.73■□□□□ 0.27
Trav8d-2Q5R1B6 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav8d-2Q5R1B6 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.73■□□□□ 0.27
Trav8d-2Q5R1B6 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.72■□□□□ 0.27
Trav8d-2Q5R1B6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav8d-2Q5R1B6 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav8d-2Q5R1B6 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav8d-2Q5R1B6 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav8d-2Q5R1B6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.72■□□□□ 0.27
Trav8d-2Q5R1B6 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav8d-2Q5R1B6 Gm13186-201ENSMUST00000118031 316 ntBASIC16.72■□□□□ 0.27
Trav8d-2Q5R1B6 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.72■□□□□ 0.27
Trav8d-2Q5R1B6 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.72■□□□□ 0.27
Trav8d-2Q5R1B6 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trav8d-2Q5R1B6 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.72■□□□□ 0.27
Trav8d-2Q5R1B6 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav8d-2Q5R1B6 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav8d-2Q5R1B6 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trav8d-2Q5R1B6 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.71■□□□□ 0.27
Trav8d-2Q5R1B6 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav8d-2Q5R1B6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav8d-2Q5R1B6 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms