Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clhc1Q5M6W3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clhc1Q5M6W3 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Clhc1Q5M6W3 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clhc1Q5M6W3 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clhc1Q5M6W3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clhc1Q5M6W3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clhc1Q5M6W3 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clhc1Q5M6W3 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clhc1Q5M6W3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clhc1Q5M6W3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.62■□□□□ 0.25
Clhc1Q5M6W3 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Clhc1Q5M6W3 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.62■□□□□ 0.25
Clhc1Q5M6W3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Clhc1Q5M6W3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clhc1Q5M6W3 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clhc1Q5M6W3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.62■□□□□ 0.25
Clhc1Q5M6W3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clhc1Q5M6W3 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clhc1Q5M6W3 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Clhc1Q5M6W3 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clhc1Q5M6W3 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clhc1Q5M6W3 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clhc1Q5M6W3 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clhc1Q5M6W3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.61■□□□□ 0.25
Clhc1Q5M6W3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clhc1Q5M6W3 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clhc1Q5M6W3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clhc1Q5M6W3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Clhc1Q5M6W3 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clhc1Q5M6W3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clhc1Q5M6W3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clhc1Q5M6W3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clhc1Q5M6W3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clhc1Q5M6W3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clhc1Q5M6W3 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Clhc1Q5M6W3 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clhc1Q5M6W3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clhc1Q5M6W3 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clhc1Q5M6W3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clhc1Q5M6W3 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Clhc1Q5M6W3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Clhc1Q5M6W3 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clhc1Q5M6W3 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clhc1Q5M6W3 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clhc1Q5M6W3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Clhc1Q5M6W3 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clhc1Q5M6W3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.6■□□□□ 0.25
Clhc1Q5M6W3 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Clhc1Q5M6W3 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clhc1Q5M6W3 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clhc1Q5M6W3 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Clhc1Q5M6W3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Clhc1Q5M6W3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Clhc1Q5M6W3 Mir5133-201ENSMUST00000174955 77 ntBASIC16.6■□□□□ 0.25
Clhc1Q5M6W3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clhc1Q5M6W3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clhc1Q5M6W3 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Clhc1Q5M6W3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clhc1Q5M6W3 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Clhc1Q5M6W3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clhc1Q5M6W3 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clhc1Q5M6W3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Clhc1Q5M6W3 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clhc1Q5M6W3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Clhc1Q5M6W3 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clhc1Q5M6W3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clhc1Q5M6W3 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clhc1Q5M6W3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.59■□□□□ 0.25
Clhc1Q5M6W3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clhc1Q5M6W3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Clhc1Q5M6W3 Gm6211-202ENSMUST00000167849 925 ntBASIC16.59■□□□□ 0.25
Clhc1Q5M6W3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Clhc1Q5M6W3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Clhc1Q5M6W3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Clhc1Q5M6W3 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clhc1Q5M6W3 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clhc1Q5M6W3 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clhc1Q5M6W3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clhc1Q5M6W3 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Clhc1Q5M6W3 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clhc1Q5M6W3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Clhc1Q5M6W3 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Clhc1Q5M6W3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clhc1Q5M6W3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clhc1Q5M6W3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clhc1Q5M6W3 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clhc1Q5M6W3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clhc1Q5M6W3 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Clhc1Q5M6W3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clhc1Q5M6W3 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Clhc1Q5M6W3 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clhc1Q5M6W3 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clhc1Q5M6W3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.58■□□□□ 0.24
Clhc1Q5M6W3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.58■□□□□ 0.24
Clhc1Q5M6W3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.58■□□□□ 0.24
Clhc1Q5M6W3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.58■□□□□ 0.24
Clhc1Q5M6W3 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clhc1Q5M6W3 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.58■□□□□ 0.24
Clhc1Q5M6W3 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms