Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Pds5bQ4VA53 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
Pds5bQ4VA53 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Pds5bQ4VA53 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC30.07■■■□□ 2.4
Pds5bQ4VA53 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC30.07■■■□□ 2.4
Pds5bQ4VA53 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Pds5bQ4VA53 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC30.07■■■□□ 2.4
Pds5bQ4VA53 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Pds5bQ4VA53 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Pds5bQ4VA53 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Pds5bQ4VA53 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Pds5bQ4VA53 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Pds5bQ4VA53 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
Pds5bQ4VA53 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC30.06■■■□□ 2.4
Pds5bQ4VA53 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Pds5bQ4VA53 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
Pds5bQ4VA53 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Pds5bQ4VA53 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Pds5bQ4VA53 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Pds5bQ4VA53 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Pds5bQ4VA53 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC30.05■■■□□ 2.4
Pds5bQ4VA53 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC30.05■■■□□ 2.4
Pds5bQ4VA53 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC30.05■■■□□ 2.4
Pds5bQ4VA53 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC30.05■■■□□ 2.4
Pds5bQ4VA53 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Pds5bQ4VA53 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Pds5bQ4VA53 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC30.05■■■□□ 2.4
Pds5bQ4VA53 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC30.05■■■□□ 2.4
Pds5bQ4VA53 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
Pds5bQ4VA53 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Pds5bQ4VA53 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC30.05■■■□□ 2.4
Pds5bQ4VA53 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC30.05■■■□□ 2.4
Pds5bQ4VA53 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC30.05■■■□□ 2.4
Pds5bQ4VA53 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC30.05■■■□□ 2.4
Pds5bQ4VA53 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC30.05■■■□□ 2.4
Pds5bQ4VA53 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Pds5bQ4VA53 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Pds5bQ4VA53 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Pds5bQ4VA53 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC30.04■■■□□ 2.4
Pds5bQ4VA53 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
Pds5bQ4VA53 AC159114.1-201ENSMUST00000220349 266 ntBASIC30.04■■■□□ 2.4
Pds5bQ4VA53 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC30.04■■■□□ 2.4
Pds5bQ4VA53 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC30.03■■■□□ 2.4
Pds5bQ4VA53 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC30.03■■■□□ 2.4
Pds5bQ4VA53 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
Pds5bQ4VA53 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Pds5bQ4VA53 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Pds5bQ4VA53 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Pds5bQ4VA53 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC30.03■■■□□ 2.4
Pds5bQ4VA53 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Pds5bQ4VA53 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Pds5bQ4VA53 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Pds5bQ4VA53 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
Pds5bQ4VA53 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
Pds5bQ4VA53 Gm37374-201ENSMUST00000194954 1829 ntBASIC30.02■■■□□ 2.4
Pds5bQ4VA53 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC30.02■■■□□ 2.4
Pds5bQ4VA53 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC30.02■■■□□ 2.4
Pds5bQ4VA53 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Pds5bQ4VA53 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Pds5bQ4VA53 Gm44430-201ENSMUST00000203376 995 ntBASIC30.02■■■□□ 2.4
Pds5bQ4VA53 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Pds5bQ4VA53 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC30.02■■■□□ 2.4
Pds5bQ4VA53 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Pds5bQ4VA53 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Pds5bQ4VA53 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC30.02■■■□□ 2.4
Pds5bQ4VA53 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC30.01■■■□□ 2.4
Pds5bQ4VA53 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
Pds5bQ4VA53 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC30.01■■■□□ 2.4
Pds5bQ4VA53 AC122901.1-201ENSMUST00000214203 1790 ntBASIC30.01■■■□□ 2.4
Pds5bQ4VA53 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC30.01■■■□□ 2.39
Pds5bQ4VA53 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Pds5bQ4VA53 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
Pds5bQ4VA53 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Pds5bQ4VA53 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Pds5bQ4VA53 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Pds5bQ4VA53 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Pds5bQ4VA53 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Pds5bQ4VA53 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC30■■■□□ 2.39
Pds5bQ4VA53 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Pds5bQ4VA53 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC30■■■□□ 2.39
Pds5bQ4VA53 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC30■■■□□ 2.39
Pds5bQ4VA53 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC30■■■□□ 2.39
Pds5bQ4VA53 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Pds5bQ4VA53 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
Pds5bQ4VA53 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
Pds5bQ4VA53 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Pds5bQ4VA53 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
Pds5bQ4VA53 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Pds5bQ4VA53 Gm9885-202ENSMUST00000186234 2209 ntBASIC29.98■■■□□ 2.39
Pds5bQ4VA53 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC29.98■■■□□ 2.39
Pds5bQ4VA53 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Pds5bQ4VA53 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
Pds5bQ4VA53 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
Pds5bQ4VA53 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
Pds5bQ4VA53 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC29.97■■■□□ 2.39
Pds5bQ4VA53 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC29.97■■■□□ 2.39
Pds5bQ4VA53 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC29.97■■■□□ 2.39
Pds5bQ4VA53 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Pds5bQ4VA53 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Pds5bQ4VA53 Gm13127-201ENSMUST00000118978 1389 ntBASIC29.97■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms